Gene Nmag_0505 details

Gene Information

• Locus tag: Nmag_0505
• ID: 8823332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 501212
• End bp: 501976
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 61%
• Product: MscS Mechanosensitive ion channel
• Protein accession: YP_003478654
• Protein GI: 289580188

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.271457
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTGGC AGGCCCTCAT CGACGAACCG GCCGTCATAG CCGCGGCAGT GCTTGCACTC 
GGGATCGTTG TCGGCTATCT GGTTGGACGA CTCAACAAGG AGTTGCTCTC AGCCTCGGGC 
GTACCGGACG CCGTCGAGGG GACGCCGTTC GAGCGGACTG CTCAGTCAAT CGGCACCTCG 
TCCGTCGAAA TCGTTGCGCG ATTGAGTTCG TGGTTCATCT ACGGCATTGC CGTCCTGACG 
GCGATTCACA TCGCCCAGTT GCTCGACACG GAGGCGTTCT GGATCCGGGT CGTCGAGTTC 
ATCCCGCAGG TGTTCATCGC GGTCCTCGTG CTCATCTTCG GCTTTATCGT GGCCGACAAG 
GCCGAACTGG CCGTCAGCGA GTACCTCCGC GGTGTCAAAC TCCCCGAAGT CTCGATCATC 
CCGAAGGTCG TCAAGTACTC CGTCCTCTAC GTCGCCTTCC TCATCGCGCT GGGACAGATC 
GGCGTCTACG TCGCGCCGCT ATTGATCCTG CTCGCGGTGT ACGCCGTCGG CATCGTCATC 
GTCGGCGCGG TCGTCTTCAA AGACTTCCTG ATCTCGAGTG CGGCGGGGAT TTACCTGCTG 
CTCAACCAGC CCTACGGGAT TGGCGACCAG ATTCGAATCG GCGAGCAGTC CGGTATCGTC 
CAGGAGGTCG ACCTCTTCGT GACGAAGATC GAGGACGACT CCGAGGAGTA CATCATCCCG 
AATCGGAAGG TCTTCGAGGA CGAACTGGTT CGTGTTCGCG ACTAG 

 

Protein sequence

MDWQALIDEP AVIAAAVLAL GIVVGYLVGR LNKELLSASG VPDAVEGTPF ERTAQSIGTS 
SVEIVARLSS WFIYGIAVLT AIHIAQLLDT EAFWIRVVEF IPQVFIAVLV LIFGFIVADK 
AELAVSEYLR GVKLPEVSII PKVVKYSVLY VAFLIALGQI GVYVAPLLIL LAVYAVGIVI 
VGAVVFKDFL ISSAAGIYLL LNQPYGIGDQ IRIGEQSGIV QEVDLFVTKI EDDSEEYIIP 
NRKVFEDELV RVRD