Gene Nmag_0486 details

Gene Information

• Locus tag: Nmag_0486
• ID: 8823312
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 483369
• End bp: 484055
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 60%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003478636
• Protein GI: 289580170

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.211465
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTCG TGCACGGAAA CGTATCCATA CCCGTGTCCC TCATCATCGA GTACGAACTG 
CGAACGCCGA TCCTCGAATC GGCAGGCCAA GTCGTCCGAA GGCTCGAGTT AGAGGAACTC 
TACGGCACAC AGGACGGAAC GTCGAAATTG CTTTTCTGGG CGTTCGCCGA CGATTTCGAC 
GCGTTCGAGG ATGCGCTCGC ATCCGACGGG ACGGTCGAAA GTCACACGAG ACTCGAGTCC 
TTCACTGATC GCAGCCTGTA CGGCGTCACG CTCACCGATG AGGCAGCGGC AAAGCTAACC 
TACCCGTTAG CTGCCGAGTA CAACGTCGCG ATCATCGACA TCACGCTCAC CGACGAGATC 
GTCGTGAGTG CTCGCGTTCC ATCCCGAGAG GCCTTACTCG AGTACCGAAA GCGCTGTCTC 
GAGAAGGGAG TCGGGTTTCG GGTACGCCGT ATTTACCGTG AGAACGAGGC CGAGGCCGAG 
ACCGAAACGG AACGGTACGG CCTCACCGAG CATCAGCGCG AGGCGCTGCA GACGGCGCTC 
GACAGCGGAT ACTTCGACGT ACCCCGGAAG GCGACGCTCT CGGAAATTGC GGACGAACTT 
GGCATTTCAG ATCAGGCACT CTCAGCCCGG CTCCGGCGCG GGCAGGCGAA CCTACTTTGG 
CAGACAATCG CAGGCGAGAC TAGTTAA 

 

Protein sequence

MTLVHGNVSI PVSLIIEYEL RTPILESAGQ VVRRLELEEL YGTQDGTSKL LFWAFADDFD 
AFEDALASDG TVESHTRLES FTDRSLYGVT LTDEAAAKLT YPLAAEYNVA IIDITLTDEI 
VVSARVPSRE ALLEYRKRCL EKGVGFRVRR IYRENEAEAE TETERYGLTE HQREALQTAL 
DSGYFDVPRK ATLSEIADEL GISDQALSAR LRRGQANLLW QTIAGETS