Gene Nmag_0407 details

Gene Information

• Locus tag: Nmag_0407
• ID: 8823229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: -
• Start bp: 401204
• End bp: 401881
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 60%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003478557
• Protein GI: 289580091

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.944318
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGTCA TGGGTGAGTT CACGATTGAC TCTGGGGACT TTGCGTTGCA CGAGACGCTG 
TCGGCTGCGC CGGAGATGGT GGTCGAGGTC GAACGACTCG TCGCGACGAG TGAAGATCGG 
CTCATGCCGT ACTTCTGGGT GACCGGCAAG GACCACGCGG CGTTCGAGGA AGCGTTCGAA 
AGGGATCCGT CGATAACAAA CGCGACGCGG GTGAGTGAGT TCGACGACAC CGTCCTCTAC 
AGGGCCGAAT GGACGGAAAA CATCGAGGCG ATTATTTACG CGTACGTCGG AATCGGTGCG 
ACGATCCTCG AGGCGACGGG AACCGGCGAG CACTGGAATC TGAAGATGCG CTTCGACGAC 
GAGGAGACGG TTTCGGACTT CCACGAGTTC TGTCGCGAGC GCGGCGTCGA CTTCGAACTC 
GACCGACTCT ACGAACAGTC CCAGCCGATG GCGAGTTCGC AGTACGGACT CACACCGACG 
CAGCGAGAGA CCCTCGTGAC AGCCTACGAG GAGGGATTCT TCGACGTGCC ACAGCAGATC 
ACGATGACCG AACTCGCTGC GTCACTCGGA ATTACCCAGC AGGCACTCTC GAAACGCTTA 
CACCACGCAC ACAAGAACCT CATCGGCCAC GTACTGACGG TGGGACAGGT CGGCGAGGAC 
CGAGGACGAC GAGACTGA 

 

Protein sequence

MSVMGEFTID SGDFALHETL SAAPEMVVEV ERLVATSEDR LMPYFWVTGK DHAAFEEAFE 
RDPSITNATR VSEFDDTVLY RAEWTENIEA IIYAYVGIGA TILEATGTGE HWNLKMRFDD 
EETVSDFHEF CRERGVDFEL DRLYEQSQPM ASSQYGLTPT QRETLVTAYE EGFFDVPQQI 
TMTELAASLG ITQQALSKRL HHAHKNLIGH VLTVGQVGED RGRRD