| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_0182 |
|---|
| Symbol | |
|---|
| ID | 8823001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 195629 |
|---|
| End bp | 196639 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003478336 |
|---|
| Protein GI | 289579870 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCAG ATCGCCTCAA ATCGAGCCTG AAGCGGGAGT TCGACCAGAG CCTGATGGCA
AAGATCGGAC TCGCGATCGC GCTCGTTATC ATTCTGGTCG CGACCTTTGC ACCGATACTC
GCAACACATC ATCCGGGCCA GACCGGACAC TTCGACGAGG AGGGAAGCTC CTATCCACCG
ATCGGATTCG ACTACGAGAC ACACGCCTGG GAGGACGGCG ACGACGGCCG TGAACGCGTC
CCGCACACGG TCGAGCCAAC GTCTGAGCAC GTACTCGGGA CGAACAACCT CGGACAGGAC
GTCTACTCGC GAATGCTGTT CGGTGCGCGA ACGTCACTGC TCGTCGGGTT GATCGGAACC
GGGCTGGCGG CTGCCTTTGG CGTGCCGTTC GGTCTGGTTG CAGGCTACTT CGGCGGGCGA
ACGGACGACT CCATGATGCG GGTCGCCGAC ATCATGCTCG CGTTCCCGTC GCTCGTCCTC
GCAATCGCAC TCATCGGGGT GTTCGGCAGA AGCGTCCAGT ACATCCCGGA CCCGATCGTC
ATGGCCGGGT TCGCCGACGG AATGCCCGAA TACGCGGTGT TACCCGGGAC CGTCACCCTC
GTCGTTGCAC TCGTCAACTG GGTGTGGTTC GCCCGCGTCG CCCGCGGTGA GGCGCTTGCG
ATACGCAACG AAGAGTACGT GAAAGCCGCA CGGAGTCTCG GCGCGAGCAA CTGGACCGTG
CTTCGCAAGC ACGTCCTGCC GAACAGTCTC ACGCCGATCA TCGTGCTCGC GACGATCCAG
GTCGCCGCGA TCATCCTCCT CGAGAGTTCG CTGTCGTACC TCGGGTTCTC CGGGACGACG
CTCTCGTGGG GGTACGAGAT CAGCCAGGGC CAGGACTACC TGCGAACTGC CTGGTGGATC
TCGACGATTC CCGGCATCGC AATCGTCCTC GCCGTGATCA GTATCAACTT GCTCGGCGAC
TGGCTCCGGG ACGCCCTCGA CCCGAACATC GAGGGAGAGG GAGGTGTCTA A
|
|---|
| Protein sequence | MISDRLKSSL KREFDQSLMA KIGLAIALVI ILVATFAPIL ATHHPGQTGH FDEEGSSYPP
IGFDYETHAW EDGDDGRERV PHTVEPTSEH VLGTNNLGQD VYSRMLFGAR TSLLVGLIGT
GLAAAFGVPF GLVAGYFGGR TDDSMMRVAD IMLAFPSLVL AIALIGVFGR SVQYIPDPIV
MAGFADGMPE YAVLPGTVTL VVALVNWVWF ARVARGEALA IRNEEYVKAA RSLGASNWTV
LRKHVLPNSL TPIIVLATIQ VAAIILLESS LSYLGFSGTT LSWGYEISQG QDYLRTAWWI
STIPGIAIVL AVISINLLGD WLRDALDPNI EGEGGV
|
|---|
| |