| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_0014 |
|---|
| Symbol | |
|---|
| ID | 8822828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 17969 |
|---|
| End bp | 19033 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TrmB |
|---|
| Protein accession | YP_003478176 |
|---|
| Protein GI | 289579710 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.336758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAG ACGAACTGCG CTCGACCGTC GAGCGCGTCG GGGATCGGTT CAACCTCGGC
GAGTACGAGA TCGACGCCTA TCTGACCGTT CTAGAGCACG GCCAGCTCAC GGCGAGCGAA
ATTGCCGACC GGACCGACAT CCCACAGCCC CGCGTCTACG ACACCGTCCG CAGCCTCAGC
GACCGTGGAC TGGTCGAACT GCGCGAATCG CGTCCGATGA AGGTCGTCGC GATCGATCCC
GGCGAGGCCT TCGACGACGT TCAGAGTTCG CTCGAGCAGA TGATCGACGA ACTGGAGGCG
CGCTACACCG CGCCCGCCCG TGACACCGAG GCCGTCTCGC TGGTCAAGTC CCGGTCGACG
ATCCTTCGAT ACCTGGAGGA GGTCATCGAC GCCGCGGAGT ACGAACTGTC GCTGTCGCTG
ACACCTGGTC TGCTGACCCG GTTCGAGGAC GAACTCCGCA ACGCCGTCGA CGCCGGCGTT
AGCGTGGATC TGCTCATTAC GCCAGCCGAC GAAGCACCCA CACCGGCGGA GTTCGAGTAC
CAGAACGTCG CGACGACCGT CCGCGCTCGA CGCGGGATCA CGACGCCGGT CATCGCCGTC
GCAGACGGGA ACTACTCCGT CTACGCGACC CAGGACGCCC TGCGTGACGA CCAGGACCGC
TACGGCGTCA TCTTCAACCG CTCCTCCCTC GGCTTCCTCG TCTCCGGCTT CTTCGGCACG
GTCCTCTGGA CGACCGCCGA AGAGACACTG AGCGAGGACG GCTCGAAGCG TTCCTACCCC
CGCAGATACG CCTCGATTCG ACGCTGCGTG AAGGACCTCA TCGAGGAAGG TGGTGAGTTC
TACGCCACCA TCGAGGGCCG CGATGTCGAA GTTGGCGGCA CCCGAATCGT TCGCGGGCGC
GTCCTCGACA TCTCCTTCGA GGTCAGCGAG GAGGTCGCGA GCCTCACCGT CGAGACCGAG
GAAGGCGAGG AGGTCACCGT CGGTGGCCGC GTCGCCGCAC TCGAGGACAT CGAGGGACAC
GAGATCCACA TCGGACGCAA CAAACCGCCG TCGATCGACG ACTAG
|
|---|
| Protein sequence | MASDELRSTV ERVGDRFNLG EYEIDAYLTV LEHGQLTASE IADRTDIPQP RVYDTVRSLS
DRGLVELRES RPMKVVAIDP GEAFDDVQSS LEQMIDELEA RYTAPARDTE AVSLVKSRST
ILRYLEEVID AAEYELSLSL TPGLLTRFED ELRNAVDAGV SVDLLITPAD EAPTPAEFEY
QNVATTVRAR RGITTPVIAV ADGNYSVYAT QDALRDDQDR YGVIFNRSSL GFLVSGFFGT
VLWTTAEETL SEDGSKRSYP RRYASIRRCV KDLIEEGGEF YATIEGRDVE VGGTRIVRGR
VLDISFEVSE EVASLTVETE EGEEVTVGGR VAALEDIEGH EIHIGRNKPP SIDD
|
|---|
| |