Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2572 |
Symbol | |
ID | 8808356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2714148 |
End bp | 2714789 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003461797 |
Protein GI | 289209731 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.998223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.00997161 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCAGTA AACCCCTGAT CAGTGCGCCG CTGGTTGAGT TGCGCGATCG CAGCATCTAC CGCGTGGGCG ACTCGGACCC GGCCGTCTGG CTGATCGACG ACCGCGAGCT GGGCGGTGTG CTGGTCAACG CCCCGGCGTA CTCCGAAGCC TTGCTGGAGG CGATTCGGGC GATCACCAAG CCCGCCTACC TGTTCCTGCC CAGCCGCCAT GGCGCGCAGG ACCTGGAGGC CTGGCGGGCG GCGGGGCTGG AGACCCTGGC GTTCGAGGCC GAGGCGCCGG CGATCCGCGC CGCCGGCGGC GAGATCGACA TCGCCTTCAA CCGCAAGCAG CGCCTGTCGC GCACCATCGA TTTCCTGCCG ATGGCCGGGG TGACCGAGGG CACCTGTGCC CTGCGCCTGA AGAACCTGCC GGGGGTCGTG TTCTTCGGCC CCGCGCTGGC ACCGGGGGCG GATGGCTGGC CTACGCTGAT CCAGAACGCG GAGGATCACT CCTTCGAGGC GCGTCTGTTC GGCGCCCTGG GCGTGAAGGA CCTGAAGTTC GCCTACGCCT TCTGCGACGG CTTCGACCCC GCCAGCACGC AGTACGGCCC GGACGCCGAC CAGCACATTC AGACCCGCAT CGAGGCGGTC TTCGACGAAT AA
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Protein sequence | MASKPLISAP LVELRDRSIY RVGDSDPAVW LIDDRELGGV LVNAPAYSEA LLEAIRAITK PAYLFLPSRH GAQDLEAWRA AGLETLAFEA EAPAIRAAGG EIDIAFNRKQ RLSRTIDFLP MAGVTEGTCA LRLKNLPGVV FFGPALAPGA DGWPTLIQNA EDHSFEARLF GALGVKDLKF AYAFCDGFDP ASTQYGPDAD QHIQTRIEAV FDE
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