Gene TK90_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2554 
Symbol 
ID8808338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2691286 
End bp2691720 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content63% 
IMG OID 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_003461779 
Protein GI289209713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.00966123 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACGG TAACCAAGGG CGCGACGGTG GAGATGCACT ACCGCCTGAT CCTGGACAAC 
GGCTTTGTCG TGGATGGCAC CGACGAGGAG ACCATCCGCC TCGAGGTCGG GGCGGGCGAG
ATCCTGCCCG GGCTGGAGGA CCTGCTGGTG GGGCTGGAGC CCGGGGATCA CCGGGAATTT
GCGATCGAGG CCGGGGCCAT GTTCCCGTTG CGGGACAATG CGGCGGTGCA GACGATGCCC
CGTTCACAGT TTCCGGCGGA CATGCCGCTG CAGAAAGACT ACATTTACGA ATTCACCAGC
CCGTCGGGTG ATGCGGTCCC GGGCCGCATT GAAGAGGTTG GCGACGAGTC CGTCACCGTG
GACTTCAACC ACCCCCTGGC CGGGCAGTCG TTCACCTTCG AGGTGGATGT GGTATCGGTT
AGCGAACCTC AGTAG
 
Protein sequence
MTTVTKGATV EMHYRLILDN GFVVDGTDEE TIRLEVGAGE ILPGLEDLLV GLEPGDHREF 
AIEAGAMFPL RDNAAVQTMP RSQFPADMPL QKDYIYEFTS PSGDAVPGRI EEVGDESVTV
DFNHPLAGQS FTFEVDVVSV SEPQ