Gene TK90_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2552 
Symbol 
ID8808336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2689348 
End bp2690202 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_003461777 
Protein GI289209711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00445829 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGAAC GCCCCCGCTT TCGCCTCAGC ATTCGCTGTC CTGACCAGCA CGGAATCGTC 
TCGCGTATCG CGGCGGCCAT TGCCGATACC GAGGGCTGGA TCACCGAGGC CGCCCAGCAC
ACCGACGAAG AGGCGGGCTG GTTCTTCATG CGCTGGGTGT TCTCGCTGCC GGCCGATGGC
GAGGCCCTGC TCGAACAGCG GCTGGCCTCC CTGGCACCCG AGCTGCGCAT GGACTGGTGG
CTGAACAATG CCGATACCCG TCCACGCGTC GTGCTCCTGG CCTCGCGAGA GCCGCATTGC
CTCAGCGACC TGCTGGCTCG CTGGAGTGCG GGCGAACTGG CGATGGAGAT TCCCGCGATC
CTCTCCAATC ATCGAGACCT GGAGCCGCTG GCCGCCTGCC ACGGGATTCC GTTCGAGCAC
ATCCCGGTGC CGAAGGACGG TCGCGAGTCC GCCTTCGCCA CGCTCCAGGA GCGCCTGGCC
CACCTGGAAC CGGAGACCAT CGTGCTCGCC CGCTACATGC AGATCCTCCC GCCGGGCCTG
TGCGCGGAGT ATCCCGAGCG CATCCTCAAC ATCCACCACA GCTTCCTGCC CTCGTTCGTC
GGTGCCCGCC CCTATCACCA GGCCTTTGCC CGCGGGGTCA AGCTGATCGG CGCGACCTGC
CACTACGTGA CCGACGAGCT GGACGCCGGC CCCATCATCG AGCAGGACGT CACCCGCATC
CGCCATGACG ACGGCGTGCA GGACCTGATC CGCAAGGGCC GCGACGTCGA ACGCTGGGTC
CTCGCCCGCG GCCTGCGCTA CCACCTCGAG GGCCGCGTCC TCACCCACGG CAACAAAACC
ATCGTCTTCG ACTGA
 
Protein sequence
MIERPRFRLS IRCPDQHGIV SRIAAAIADT EGWITEAAQH TDEEAGWFFM RWVFSLPADG 
EALLEQRLAS LAPELRMDWW LNNADTRPRV VLLASREPHC LSDLLARWSA GELAMEIPAI
LSNHRDLEPL AACHGIPFEH IPVPKDGRES AFATLQERLA HLEPETIVLA RYMQILPPGL
CAEYPERILN IHHSFLPSFV GARPYHQAFA RGVKLIGATC HYVTDELDAG PIIEQDVTRI
RHDDGVQDLI RKGRDVERWV LARGLRYHLE GRVLTHGNKT IVFD