Gene TK90_2541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2541 
Symbol 
ID8808325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2677266 
End bp2678222 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content68% 
IMG OID 
Productpolysaccharide deacetylase 
Protein accessionYP_003461766 
Protein GI289209700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0393046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0973746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCGCA TGCTGCGAGT ACCGTTGTCC ATGCTGTCGC CGCAAGGCCG GCGCGCGCGC 
CTGACGATCC TCGCCTATCA CCGCGTGCTG ACGGACCCCG ACCCGCTGCG ACCGGAAGAC
CCGGTGGCCG AGACCTTTCG CTGGCAGATG CGCCTGCTGG CGCGGGAGAT GAACCCGCTG
CCGCTGGACG AGGCCATCGA GCGCCTGCAG GAAGGCCGGC TCCCCGCCCG GGCCGTTGCG
GTCACCTTCG ACGACGGTTA TGCCGACAAC GCGGAGGTCG CGTTGCCGAT CCTGCGCGAG
GAAGGGGTGC CGGCAACGTT CTTTGTCGCC ACCGGCTATC TGAATGGCGG CTGCATGTTC
AACGACATGC TGATCGAAAC GGTTCGCCAG ATTCCCTCCA TGGCAGTGGA CCTGACCCCG
GAGGGACTGG GCACGCGTTC ATTGGACTCC GTGGCGCAGC GCCGCTCCAC GATCCACGCC
CTGATCGGGG CCCTCAAGTA TCGGCCGCTG ACCGAACGCA GCCGTCGCGC CGAGGCGCTG
GGTGCGCGTT TCGGCGTCAT GCCCCCCGGC GATCTGATGA TGACCGATGC CCAGGTTCGT
GAGCTGGCCG ATGCCGGCAT GGGAATCGGC GGGCACACCG TCCTGCACCC GATCCTGGCC
GAGACCGATG CCGCGACCGC ACAGCAGGAG ATCGCGGAGG GCAAGGCCGA ACTCGAGGCC
CTGGTGGGAC GTCCCGTACG GCTGTTTGCC TACCCCAACG GGCGCCCCGG CAAGGACTAT
GCGCCGGAGC ATGTCGAGAT GGTGCGTGCC AGTGGGTTCG AGGCTGCGGT ATCCACGATG
GCGGGTGCCG CTGGCCGCGA TACGGATCCG CTGCAGCTGC CGCGCTTTAC CCCCTGGGAC
CGAACGCCTC TGCGCTTTGG CCTGCGGCTG GCGCGCAATC TGGCTTCAGC CCACTGA
 
Protein sequence
MERMLRVPLS MLSPQGRRAR LTILAYHRVL TDPDPLRPED PVAETFRWQM RLLAREMNPL 
PLDEAIERLQ EGRLPARAVA VTFDDGYADN AEVALPILRE EGVPATFFVA TGYLNGGCMF
NDMLIETVRQ IPSMAVDLTP EGLGTRSLDS VAQRRSTIHA LIGALKYRPL TERSRRAEAL
GARFGVMPPG DLMMTDAQVR ELADAGMGIG GHTVLHPILA ETDAATAQQE IAEGKAELEA
LVGRPVRLFA YPNGRPGKDY APEHVEMVRA SGFEAAVSTM AGAAGRDTDP LQLPRFTPWD
RTPLRFGLRL ARNLASAH