| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2499 |
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| Symbol | |
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| ID | 8808283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2625439 |
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| End bp | 2628246 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | PEP-CTERM system TPR-repeat lipoprotein |
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| Protein accession | YP_003461725 |
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| Protein GI | 289209659 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00842249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTC CCCGTTCTGT ATCCCGTGTG GTGCACGCGC CCCGCCGTAC CCTCCCGCGC
CTGGCCCCGT TGCTGATGGC GCTGACTCTG GTCGGCTGCG ATGCCCTGGG CACCCCGACC
GAGGCCGAGC ACCGGGAACG TGCCGAGCGC CACATGGACG CGGGCGAATA CGCCGCGGCC
ACCATCGAAT ACCGCAACGC ACTGCAGCAC AACGCGGACC CCGAGATCCG GGGCCGCCTG
GGCCTGGCCT ATCTGCGCGA CCAGCAGCCG GAACCGGCCG TACGTCACCT GCAGCGGGCC
CTGGAGATGG GTGCGGACCC GAATGTGTAT GCCCTGCCTC TGGCGCGCCT GCTGTTCACG
CTGGGCGGCA GTGGCGCGAT CGCCGAGATC CCCGAGGCCG ATGCCCTGGA AGGCGAGGAT
GCCGCGCGTC TGCTGGCCTA CCGGTCGCTG GCGGCCTATC AGGCGGGAGA TGCCAGCGCC
GGATCGGATT ATCTTGAGGC CGCCCGGGAG GTCCAGGACG ACCTGGTCGA GATTCAGCTG
GCGCGCGGCT ACCAGGCAAT GTCCGATGGC GACGCCGAGC AGGCCATGAA CATGACCGAT
GCGGCCCTGG AAACGGACCC CGAATTTTCC CCTGCCTGGT CCCTCAAGGG CGATCTGGAA
CGGGTGCAGG GCGACCCCGA GGCTGCGCTC AAGGCCTTTA GCCGCGCCGT CGAGCTGCGC
CCGGATGCGA TCGCCGAACG CCTGAAGCGC GGGCTGATGC ACGTCGAACT GGAGCAGTTC
GACGAGGCCC GGGCCGATGG CAAGTTCCTG AAGGATGGCG CACCCAATCA CCCCGGCGGC
CACTTCCTGC TGGGGCTGAT CGAGTTCGAG ACGGGTGAAC CCCTGCAGGC CCGCCCCCAC
CTGGAAGAGG CGCTGGCGGC CTCGGCCAAC TACCGTCTCG CGATGCCCTA TCTGGCGGCG
ATCCAGCTGG AGGAAGGCAA CTGGTCCCAG GCGGAGCGCC TGCTGGAGCG CCATCATGCG
CTGGGCCCGG CCAATGCGAT GAGCTACCGG CTGCTGGCGC AGCTGCGCAT CGAACAGGGC
CGCACGCAGG AGGCGCGACG GATTCTGGCC GAGGCACTGA GCGAGCGGCC CGACCTGATC
GAGGCCCTGG GCGATCAGCT CGCCGCGCTC TATATCGGCG AGGGCGACAC CGACAGCGGG
ATCGAGGTCC TGCGCGAGGC CCTGGCCAAC CGCGCGGACC GCCCGGAGCT GCAGGAGATG
CTGGGAATCG CCCTGGTGCG GCACGGCGAC CACGAGCAAG GCATGGCGCT GCTGCACCGG
GTCGCCAGCG AAAGCGCGGA TGTACGCCTG GCCGACTATT CGGTGGCGCT GGCACATATC
CGTGACGAGC AGTACGAACA GGCCCTGGAG GCTACTCAGC GCCTGCGCGA CAAAGACCCG
GAAAACCCGC AGGGCTTCAA CCTGATGGGC GCCGCCCTGC TGGGGCTGGG CGAAATCCAC
GAGGCCCGCC TGATCTACCA GGAAGGGCTG TCGCTCCACC CGGACAACAG CACCCTGGCC
CTGAACCTGA GCTCGCTCGA AGTCCGTCAG GGCAACCTGG AGACGGCCCG CGAGATCCTC
GAGGACCTCC AGGAACGCGA CCCCGGGCAT CCCACCTCGG CGATTCGGCT GGCAACACTG
CACTTTCAGC AGGGCGAGAT GGAGGCCGGC AAGCGCTGGC TGCAGGACGC AATCGAGGCA
CACCCGGATC GGATCGAGCC CTACCTGATG CTGGCACGCG CCCAGAACCA GCAGGAGGAT
CACGCCGCCG CCCGATCCAC CCTGGAAAAA GCACGTGAAC ATCACCCCAA CGACACCCGA
GTGCTGGGCC TGCTGGTCGA CCTGCAGGAG CGCGAGGGGG ACTTCGCGGG CGCGGCACAG
ACGCTTGGGC ACCTGGCCGT ACTGCGTCCG GATGCCGCGG AGCTGCGCTT CCGGCAGGCG
CGCAATCTCG CCGCTCTGGG CGAGACCGAG CAGGCGGTCA CGGCCCTGCG CCAGACGCTG
TCGATCGACT CCAGCCATAT GAGCGCACGC ATGGTGCTGA CCCGCCACCT GAGTCTGGCC
GGCGAGGTCG ATGAGGCGCG TCAGGTCTTC GAGCCCGTCG TGGAGCGCGC CCCGGAGGCA
GCGCAGGTGA TCGCGCAGCA GGCCTGGTTC GACGCGCAAG CCGGCGAGCT CGAAAAAGCG
ATCGAAGGCT ACGAGCGTGC ACTCGGGCGC GAGTCCCGAC GCGACTGGCT GGTGGAAAAA
TACCAGGCTC AGCAGCGCGC CGGCCATTCC GAGGCGGCCC TGGAGACGCT GAAGGGCTGG
CTGCAGGAGC ACCCCGAAGA TGCGGCCTCG CGCCACCTGC TCGGCTCGGC GCAGATCAAC
GCCGGCCACG AGGCCGAGGC CCTGGACACC TACGAAACGG TGCTGGAGCA GCGCCCCAAC
GATGTCATCG CGTTGAACAA CGCGGCGTGG CTGGCCCGCG AGACGGACAA CCCGCGCGCC
CGCGAGTATG CCCGGCGGGC CGTCGAACTG GCCCCGGATC AGCCCGCAAT TCTCGACACC
CTGGGCGTGG TCCTGCTGGA GGGCGGTGAC ACCGAGAGCG CCCTGGAGAC CCTGCAGCGG
GCCTACCGGA TGAGCCCGCA GGCACCGGAT ATCGGGTTCC ATCTGGCGCA GGCCTACCAG
GCCAGCGGCG AAACCGAACA GGCGCGGGCC CTGCTGACGG AGCTGCTGGA GGCACACGAG
GACTTCCCGG AACGCGAGCG GGCCCAGTCG CTGCGCGAGT CGCTATAG
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| Protein sequence | MKTPRSVSRV VHAPRRTLPR LAPLLMALTL VGCDALGTPT EAEHRERAER HMDAGEYAAA
TIEYRNALQH NADPEIRGRL GLAYLRDQQP EPAVRHLQRA LEMGADPNVY ALPLARLLFT
LGGSGAIAEI PEADALEGED AARLLAYRSL AAYQAGDASA GSDYLEAARE VQDDLVEIQL
ARGYQAMSDG DAEQAMNMTD AALETDPEFS PAWSLKGDLE RVQGDPEAAL KAFSRAVELR
PDAIAERLKR GLMHVELEQF DEARADGKFL KDGAPNHPGG HFLLGLIEFE TGEPLQARPH
LEEALAASAN YRLAMPYLAA IQLEEGNWSQ AERLLERHHA LGPANAMSYR LLAQLRIEQG
RTQEARRILA EALSERPDLI EALGDQLAAL YIGEGDTDSG IEVLREALAN RADRPELQEM
LGIALVRHGD HEQGMALLHR VASESADVRL ADYSVALAHI RDEQYEQALE ATQRLRDKDP
ENPQGFNLMG AALLGLGEIH EARLIYQEGL SLHPDNSTLA LNLSSLEVRQ GNLETAREIL
EDLQERDPGH PTSAIRLATL HFQQGEMEAG KRWLQDAIEA HPDRIEPYLM LARAQNQQED
HAAARSTLEK AREHHPNDTR VLGLLVDLQE REGDFAGAAQ TLGHLAVLRP DAAELRFRQA
RNLAALGETE QAVTALRQTL SIDSSHMSAR MVLTRHLSLA GEVDEARQVF EPVVERAPEA
AQVIAQQAWF DAQAGELEKA IEGYERALGR ESRRDWLVEK YQAQQRAGHS EAALETLKGW
LQEHPEDAAS RHLLGSAQIN AGHEAEALDT YETVLEQRPN DVIALNNAAW LARETDNPRA
REYARRAVEL APDQPAILDT LGVVLLEGGD TESALETLQR AYRMSPQAPD IGFHLAQAYQ
ASGETEQARA LLTELLEAHE DFPERERAQS LRESL
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