Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2430 |
Symbol | |
ID | 8808211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2551125 |
End bp | 2552675 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003461656 |
Protein GI | 289209590 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.613289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGACGTT TTCATCTCCC GATCCTGATC GTGCTGTTGA GCACGATCGG GCTCGGGATC TTTGCGTACA AGGTCATCGC CCTGGACATG CCCGTCATGC CCGGGGCATC GGCCGAGACC TGGCAGGTTG AAGCACGCGT TCGCTATCAG CCCACCGGCG GTGCGGCCAA CGTGCAGCTG CGCATCCCGG ATCGCCTGCC CAATTTCGCC ATCCTGGATG AAGGCTTCGT CTCGCGCGGC TATGGCCTGA ATACGCTGCG CGGCCAGGAC GACCGCATTG CCCAATGGAC CACACGGCAG CCGCGCGGAG AACAGGTGCT GTACTACCGG GCGACCCTCT ACCGCGACAG CGATGACCGC TCGGACGCTG ACTACCCAGG CCCCGTCGGG GCCCCTGAAT GGACCGAGCC CTACCGCTCC GCAGCGGATG CGCTGATCGA GGACGTCCGC AGCCGATCTT CGGATATTCA GACCTTCGCC TCGGTGCTGG TCAATGACCT TGCCCACGCC GCGCCCGCAT CGAATGCCGC GGTATTCGCC GATGACGGCA GCGACCGCGT GCAACGCAGC CAGACCCTGA TCGAACTCCT GGCCACGGCC CGGATTCCCG CGCGCATGGT CACCACGTTG CACCTGCGCG ACGGGCGCCG CGACATACGC CCGGAAACCT GGATCGAGGT CCACAACACG CGGCGCTGGG TGCCCATTCA CCCGCTGTCG GGCGAGATCG AATACCCGGA CGATGTGGTC GTCTGGGCCC ATGGGTCCGC GCCCCTGCTG GAGGTCTCCA ACGGACGCGA CGCCGAGGTC CGCTTTGCCG TCTCGCGGGG CGTACAGGAC GCCCTGACCA CTGCCCAGCG ATTCGGCGAG ACCGTCAACG CCCAGTTGAT GGAGTTCTCC ACCCTGAATC TCCCGCTGGG GACCCAGAAC ACCTACCGCG TGCTGCTCAT GGTCCCCCTG GGGGCCATGA TCATCGTGTT CCTGCGCAAC GTGATCGGCG TCCAGACATT CGGCACGTTC ATGCCGGTGC TGATCGCGCT GTCCTTTCGC GAGACGCAGC TGCTGGCCGG GATCATCCTG TTCACCCTGA TCGTGTCGCT CGGCCTGGCC GTGCGCTTCT ATCTCGAACA CCTGCGATTA CTGCTCGTGC CACGACTGGC GGCAGTGGTC AGCGTGGTCA TCATGCTGAT GCTCGGGATC AGCATCCTTT CGCACCAGTT GGGGTTCGAG CGGGCGCTCG CGCTGTCGCT GTTCCCGATG GTCATCCTGG CCATGACGAT CGAGCGCATG TCCGTGGTCT GGGAAGAACA CGGTCCATCG GACGCGATCA CCCAGGGCAT CGGCAGCCTG GCCGTGGCCG CCGCCGCCTA TGGGCTGATG GCCAATCGCC ACCTGGAACA CCTGTTGTTC GTATTCCCCG AACTGCTGCT GGTACTGCTG GCGATGACCC TGCTGCTCGG GCGCTACACG GGCTATCGCC TGAGCGAGCT GTTCCGTTTC GGCCGCATGC AGGAGGCCAT GCAGCCCTCC AGACGCTCGG AGGATCGCTA G
|
Protein sequence | MRRFHLPILI VLLSTIGLGI FAYKVIALDM PVMPGASAET WQVEARVRYQ PTGGAANVQL RIPDRLPNFA ILDEGFVSRG YGLNTLRGQD DRIAQWTTRQ PRGEQVLYYR ATLYRDSDDR SDADYPGPVG APEWTEPYRS AADALIEDVR SRSSDIQTFA SVLVNDLAHA APASNAAVFA DDGSDRVQRS QTLIELLATA RIPARMVTTL HLRDGRRDIR PETWIEVHNT RRWVPIHPLS GEIEYPDDVV VWAHGSAPLL EVSNGRDAEV RFAVSRGVQD ALTTAQRFGE TVNAQLMEFS TLNLPLGTQN TYRVLLMVPL GAMIIVFLRN VIGVQTFGTF MPVLIALSFR ETQLLAGIIL FTLIVSLGLA VRFYLEHLRL LLVPRLAAVV SVVIMLMLGI SILSHQLGFE RALALSLFPM VILAMTIERM SVVWEEHGPS DAITQGIGSL AVAAAAYGLM ANRHLEHLLF VFPELLLVLL AMTLLLGRYT GYRLSELFRF GRMQEAMQPS RRSEDR
|
| |