| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2413 |
|---|
| Symbol | |
|---|
| ID | 8808194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2536164 |
|---|
| End bp | 2537336 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | twitching motility protein |
|---|
| Protein accession | YP_003461639 |
|---|
| Protein GI | 289209573 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGTG ACAAGGCGAT CAAGTACATG CACGACCTGC TCCGCGCCCT GGTGGACCGG
GGTGGCTCGG ACCTGTTCAT CACGGTCGGC ATGCCGCCAG CGGCCAAGAT TGACGGCCGC
GTGGTGCCGA TGACCGAGCA GAAGCTCACG CCTTCGCATA CCCAGGCGCT GGTGCGCGCA
CTGATGAACG ACAAGCAGTC CGCGGAGTAC GAGCGCCATC AGGAGTGCAA TTTCGCGATC
GGCCTGCAGG GCGTGTCGCG CTTTCGCGTG AACGTGTTTA CTCAGCGCGG CAGCCCCGGA
ATGGTGCTGC GCACGATCAA CTCGGTGATC CCGAAGTTCG AGGACATCCA GATGCCGCCG
CAGCTGGAGA AGATCACCAT GGAGCGCCGC GGGCTGGTGA TCTTCGTCGG GGGGACCGGC
TCGGGCAAGT CGACCTCGCT CGCCGCGATG ATCGGCCATC GCAACCGCAA TGCCCCCGAT
CACATCGTCA CCATCGAGGA CCCGATCGAG TTCGTCCACG AACACGAAAA GAGCATCATC
ACCCAGCGCG AGGTGGGCGT GGACACCGAG GGCTACGAGA TCGCGCTGAA GAACACCCTG
CGTCAGGCGC CGGACGTGAT CCTGATCGGC GAGATCCGGG ATCGGGAGAC GATGGACTAC
GCGATCGCCT TTGCCGAGAC CGGTCACCTG TGCCTGTCCA CCCTGCACGC CAACAGCACC
AACCAGGCGC TGGACCGCAT CATCAACTTC TTCCCCGAAG ACCGGCGCGA GCAGTTGCTG
ATGGACCTGT CGCTGAACCT CAAGGCGGTG ATCTCGCAGC GCCTGGTGCG GCAGGAGAAT
GGCGAGGGCC GTGTGCCGGC GGTAGAAATC CTGATCAACA CCCCGTTGAT GGCCGACCTG
ATGCTGAAGG GTGCCGTGCA CGAGATGAAG GAGCTGATTT CGCGCTCCCG CGAGCAGGGC
ATGCAGACCT TCGACCAGGC CCTGTTCGAC CTCTACGAGA CCCGCAAGAT CAGCTACGAG
GAGGCCCTGC GCAACGCCGA TTCGGTGAAT GACCTGCGGC TGCGCATCAA GCTCGACTCG
CAGCGTGCAC AGGATGACGG TGCACCGGCA GTGGCCGACA CGGGCGAGGG CCTGTCCGTG
GACGACCGTC CCGAGGACTA CAGTGTCCGC TAA
|
|---|
| Protein sequence | MDRDKAIKYM HDLLRALVDR GGSDLFITVG MPPAAKIDGR VVPMTEQKLT PSHTQALVRA
LMNDKQSAEY ERHQECNFAI GLQGVSRFRV NVFTQRGSPG MVLRTINSVI PKFEDIQMPP
QLEKITMERR GLVIFVGGTG SGKSTSLAAM IGHRNRNAPD HIVTIEDPIE FVHEHEKSII
TQREVGVDTE GYEIALKNTL RQAPDVILIG EIRDRETMDY AIAFAETGHL CLSTLHANST
NQALDRIINF FPEDRREQLL MDLSLNLKAV ISQRLVRQEN GEGRVPAVEI LINTPLMADL
MLKGAVHEMK ELISRSREQG MQTFDQALFD LYETRKISYE EALRNADSVN DLRLRIKLDS
QRAQDDGAPA VADTGEGLSV DDRPEDYSVR
|
|---|
| |