| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2409 |
|---|
| Symbol | |
|---|
| ID | 8808190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2531379 |
|---|
| End bp | 2532401 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | aspartate carbamoyltransferase |
|---|
| Protein accession | YP_003461635 |
|---|
| Protein GI | 289209569 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.891458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA CCGTGGACAC CCCGGTCCTG GCCGGGGCCA CCCGCCTGCC GGAACCGGGC
CCGTTGCCCA ATCACCTGCA GCTGACCGAT GACGGCCAGC TGCGCCACCT GCTGACCATC
GAGGGCCTCA ACCGCGATCT CCTGAACGAG ATCCTGGATA CCGCCGAGTC GTTCGCGAAC
ATGAACGAGA AGGCAGTGAA GAAGGTCCCG CTGCTGCGCG GCAAGACCAT CGTCAATCTG
TTCTTCGAGG CCAGCACCCG CACCCGCACC ACCTTCGAAC TGGCCGCCAA GCGCCTGTCC
GCGGACGTAC TCAACATCAA CATCAGCACT TCCTCGGCGG TCAAGGGCGA AAGCCTGCTG
GATACCCTGC GCAACCTCGA GGCGATGAAC GTGGACATGT TCGTGGTACG CCACGAGGAG
AGCGGGACCG CGCATTTCAT CGCCCGCCAT GTCGCCCCCG GCATCAGCGT GCTGAACGCC
GGCGACGGCC GCCACGCGCA CCCCACCCAG GCGTTGCTGG ACATGTTCAC CATCCGCCGG
CACAAGGGCG ACTTCACCAA GCTGAAGGTC GCGATCGTGG GCGACATCCT GCACTCGCGC
GTCGCGCGCT CGCAGATCCA CGCGCTCAAC ATCCTGCAGA CCGGCGAAGT ACGTGTGGTC
GCACCCTGTT CGCTGTTGCC GGCGAATGTC GACCAACTCG GCGTGCACGT CTACAACGAC
CTCGACGCCG GCCTGAAGGA CGTCGACGTG ATCATCATGC TGCGTCTGCA GCGCGAGCGC
ATGGAGCACG CCCATCTGCC CTCCGAGCAC GAGTACTACC AGCTGTTCGG CCTGACCTCG
CGCCGTCTGC AACTGGCGCA CCCCACCTGC CTGGTGATGC ACCCGGGCCC GGCGAATCGC
GGCGTGGAGA TCGAGTCCGC GGTGGCGGAC GGGCCGCACT CGGTGATCCT GCAGCAGGTG
ACCTACGGCA TCTCGGTCCG CCAGGCCGTG ATGTCCATGG TGATGGGGGC GCATCAGTCG
TGA
|
|---|
| Protein sequence | MSDTVDTPVL AGATRLPEPG PLPNHLQLTD DGQLRHLLTI EGLNRDLLNE ILDTAESFAN
MNEKAVKKVP LLRGKTIVNL FFEASTRTRT TFELAAKRLS ADVLNINIST SSAVKGESLL
DTLRNLEAMN VDMFVVRHEE SGTAHFIARH VAPGISVLNA GDGRHAHPTQ ALLDMFTIRR
HKGDFTKLKV AIVGDILHSR VARSQIHALN ILQTGEVRVV APCSLLPANV DQLGVHVYND
LDAGLKDVDV IIMLRLQRER MEHAHLPSEH EYYQLFGLTS RRLQLAHPTC LVMHPGPANR
GVEIESAVAD GPHSVILQQV TYGISVRQAV MSMVMGAHQS
|
|---|
| |