| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2406 |
|---|
| Symbol | |
|---|
| ID | 8808187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2529872 |
|---|
| End bp | 2530450 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF179 |
|---|
| Protein accession | YP_003461632 |
|---|
| Protein GI | 289209566 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.802635 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.951535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAG CCCCTTCCAG CTCGAGCGCG GCCAGCCTGC GCGATCACTT CCTGATCGCG
ATGCCGAGCC TGAACGATGG CTACTTCAGC CATGCGGTCA CCTACATCTG CGACCACGAC
GCCGAAGGGG CCCTGGGGCT GGTCATCAAC CAGCCCACCG AGTTGTCGCT GCGCGACCTG
CTGCAGCACG TCGATCTCGA GCCTCGCGAC GAGCTGCCGG AGATCCCGGT CTACCGGGGC
GGCCCGGTCC AGCCCGAGCA CGGCTTCGTG CTGCACACTG GAAAGCCCGA GTGGCGGGGC
AGCCAGCCCA TAACCGACTC CATCGTACTG ACCACCTCGC GCGACATCCT GGAGGCCATC
AACGAGGGCC GCGGCCCGCA CCGCGTCCTC ATCGCCCTGG GACACGCCGG CTGGGGGCCG
GGGCAACTCG AGAGCGAACT GGCCGATAAC GCCTGGCTGA CCACCCGCGC CAATGCCGAC
ATCCTGTTCG ACCACCCCAG CGCCGAGCGC TGGGCCGGGG CGGCCAAGCT GATCGGCATC
GACGTCAACC TGATCAGCTC CGCGCCCGGC CACGCCTGA
|
|---|
| Protein sequence | MTQAPSSSSA ASLRDHFLIA MPSLNDGYFS HAVTYICDHD AEGALGLVIN QPTELSLRDL
LQHVDLEPRD ELPEIPVYRG GPVQPEHGFV LHTGKPEWRG SQPITDSIVL TTSRDILEAI
NEGRGPHRVL IALGHAGWGP GQLESELADN AWLTTRANAD ILFDHPSAER WAGAAKLIGI
DVNLISSAPG HA
|
|---|
| |