Gene TK90_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2393 
Symbol 
ID8808174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2514632 
End bp2515486 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content62% 
IMG OID 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_003461619 
Protein GI289209553 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.235833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.350806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACC AAAAACGCGT CTTCAGCGTT GAATTCTTCC CGCCCAAGGA CGAGGCCGGG 
GCCGAACGGC TGGCCAAGGC CCGCAAGCGT CTGGGCGCCC TCAAACCCGA GTTCTACTCC
GTAACCTTTG GTGCCGGCGG CTCGACCCGT GACCGCACCC TGGAAACGGT CAAGGACATC
ATCAACAAGG ACGGCATCCC GGCCGCCCCG CACGTCTCCT GTATCTCCTC GACCAAGGGC
GAGCTGCACG AGCTGCTGTC GACCTACCGC GACATCGGCG TCAACCGTAT CGTCGCACTG
CGCGGCGACC TGCCGTCCGG CACCAAGAAC TCCGGCGGCG ACTTCCGCTA TGCCTCCGAG
CTCGTCGAGT TCGTGCGCGC CGAGTTCGGT GACCAGTTCA AGATCGAGGT GGCGGCCTAT
CCGGAGTTCC ATCCGCAGGC CCCGAACGCC GAGAAGGACC TGGAGAATTT CAAGACCAAG
GTGGACGCCG GCGCCGATGC CGCGATCACC CAGTACTTCT ACAACGTGGA CGCCTACGAG
GCCTTCATGG AACGGGTGGA GAAGATGGGC ATCACTATCC CGATCATTGT CGGGATCATG
CCGATCACCA ACTACACCCA GATCGTGCGC TTCTCCGAGA TGTGCGGCGC CGAGATCCCG
CGCTATATCC GCAAGCGGAT GGAGGCCTAT GGCGACGACA AGGAGTCGAT CCGCAAGTTT
GGCATCGAGA TCGCCACACG CCTGACCGAC GACGTCCTCG ACAAGGGCGC CCCGGGCATC
CACTTCTACT CCATGAACCA GGCCGGTCCG ACCGAGACCA TCTGGAAAAA CCTGGACCTG
GACAACCGTC GGTAA
 
Protein sequence
MSDQKRVFSV EFFPPKDEAG AERLAKARKR LGALKPEFYS VTFGAGGSTR DRTLETVKDI 
INKDGIPAAP HVSCISSTKG ELHELLSTYR DIGVNRIVAL RGDLPSGTKN SGGDFRYASE
LVEFVRAEFG DQFKIEVAAY PEFHPQAPNA EKDLENFKTK VDAGADAAIT QYFYNVDAYE
AFMERVEKMG ITIPIIVGIM PITNYTQIVR FSEMCGAEIP RYIRKRMEAY GDDKESIRKF
GIEIATRLTD DVLDKGAPGI HFYSMNQAGP TETIWKNLDL DNRR