| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2378 |
|---|
| Symbol | |
|---|
| ID | 8808159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2496835 |
|---|
| End bp | 2498055 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) |
|---|
| Protein accession | YP_003461604 |
|---|
| Protein GI | 289209538 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0813409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0779687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGG ATTTCACCCA GCGCGCGCTG GACTACCACG AACAGCAGCC GGCCGGGAAG
CTGGCCATCC ATATCACCAA GCCCACGGCG ACCCAGGATG ATCTCTCCCT GGCCTATTCG
CCGGGCGTGG CCGCGCCGGT GCGCGCGATT GCCTCCGACC CGGAGCTCGC CTACCGCTAT
ACCGGCAAGG GCAACCTGGT CGCGGTGATC ACCGATGGCA CAGCCGTGCT GGGGCTGGGC
AATGTCGGCG CGCTGGCGGC CAAGCCGGTG ATGGAGGGCA AGGGCGTGCT GTTCAAGGCC
TTCGCCAACA TCGACGTCTA CGACATCGAG GTGGATGCGC CGCAGCCGGA GGACTTCATC
AACACCGTGG CCCGCATTGC CGGCGGTTTC GGCGGGATCA ACCTCGAGGA CATTGCCGCA
CCGCACTGCT TCGAGATCGA GCGCCGCCTG TCCGAGCGCC TGGATATCCC CGTCTTCCAC
GACGACCAGC ACGGCACGGC GGTCATCACC GCGGCCGGTC TGGTCAATGC CCTGGAGATC
CAGGGCAAGA AGCTCAGTGA CGCGAAGATT GTCTGTGTGG GCGCCGGCGC GGCCGGCATC
GCCTCCATGC AGCTGCTGCT GCGCCTGGGG GCGAGCAAGA AGAACCTGTT CATGGTGGAC
CGCAAGGGCG TGATCCACAG CCAGCGCAAC GACCTGAATG AATACAAGCA GATCTTCGCG
GTCGATACCG AGGCGCGCAC GCTGGAAGAC GCCTGCGACG GGGCGGATGT CTTCATCGGG
CTGTCGGGCC CCGATCTGCT GACGCCCGAG ATGCTGAAAT CCATGGCGCC AAAGCCGGTG
ATCTTCGCGC TGTCCAACCC GGATCCGGAG ATCCGTCCGG AACTGGCGCT CGAGACGCGC
GATGACCTGA TCATGGCCAC GGGCCGCTCG GACTACCCCA ACCAGGTCAA CAACGTGCTG
GGCTTCCCGT TCATCTTCCG CGGTGCGCTG GATGTGCGCG CGCGCCGGAT CAATGACGAG
ATGCTGGTCG CGGCCGTGCA TGCGCTGGCC GCGCTCGCCC GCGAGCCGAT CCCGCAGGCG
GTGCTGGACG CCTACGGCCT GGAGGCACTC GAGTTCGGTC CGCATTACAT CCTGCCGACC
CCGTTCGATC CGCGCCTGAT CGATACCGTG CCGCAGGCGG TCGCCCAGGC GGCGCGCGAC
AGCGGCGTCG CCCGCCGCTA A
|
|---|
| Protein sequence | MTKDFTQRAL DYHEQQPAGK LAIHITKPTA TQDDLSLAYS PGVAAPVRAI ASDPELAYRY
TGKGNLVAVI TDGTAVLGLG NVGALAAKPV MEGKGVLFKA FANIDVYDIE VDAPQPEDFI
NTVARIAGGF GGINLEDIAA PHCFEIERRL SERLDIPVFH DDQHGTAVIT AAGLVNALEI
QGKKLSDAKI VCVGAGAAGI ASMQLLLRLG ASKKNLFMVD RKGVIHSQRN DLNEYKQIFA
VDTEARTLED ACDGADVFIG LSGPDLLTPE MLKSMAPKPV IFALSNPDPE IRPELALETR
DDLIMATGRS DYPNQVNNVL GFPFIFRGAL DVRARRINDE MLVAAVHALA ALAREPIPQA
VLDAYGLEAL EFGPHYILPT PFDPRLIDTV PQAVAQAARD SGVARR
|
|---|
| |