| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2340 |
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| Symbol | |
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| ID | 8808121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2462422 |
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| End bp | 2463363 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003461566 |
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| Protein GI | 289209500 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGA GCGAGCTGCG CTATGTCGTT GCGGTGGCCG ACCGGCGCCA TTTTGGTCGA
GCGGCCGAGG CTTGTCATGT CAGTCAGCCG TCTTTGTCCG TCGCCATTCG CAAACTTGAA
GATGAACTGG GGGTTACGCT GTTCGAGCGT GGCCGTGGCG AGGTCAGCGT GACCCCGGCC
GGCGAGCAAA TCGTGACCCA GGCCCGTCGG GTGCTGACCG AGGTGGAGCA TCTGCGTGCG
GTGGCGGTGC AGAGTCAGGA CCAGCTGGCG GGTCCCCTGC GACTCGGGGC CATCTACACC
ATTGGCCCGT ACCTGCTGCC CGAGCTGATC CCGGTGCTGC GCGAGCGTGC ACCCAGAATG
CCGCTGGTGA TCGAGGAGAA CTACACCGAC CGATTGCGCG AGCGACTGAA GCACGGCGAA
CTGGACGCGA TCATCATCTC GTTGCCGTTC GAAGAGCCGG GGGTGGTCAC GCTGCCGTTG
TACGACGAGC CTTTCGTCGC GGTGCTGCCG GGCGGCCACC CCCTGCAGGA CAAGAAGACG
CTGACCCTCG AGGACATGGC GGACGCCACC TTGCTGATGC TCGGTGCCGG GCACTGCTTC
CGTGATCAGG TGCTGGAGCG CTGTCCCGCC TGCCAGAGGA CGGTCACCGC CGATGGCAGT
ACGCCGCGCA ATATGGAGGG CTCCTCGCTG GAGACCATTC GCCATATGGT GGCCTCGGGT
ATGGGCGTGA CCATTCTGCC GTGTACGGCG GTGGGGGCCG ATCGCTACGC CCAGCGCCTG
CTGGCCGTGC GTCGATTCGA GGACCCGGCG CCCAGCCGCC GGGTAGCGCT GGCCTGGCGT
ACCAGTTTCC CGCGGCCGGA GGCGATCGAG GCCCTGCGTC AGGCCATCCT GGCCACGGCG
CTCACCTGTG TGGATTTCAT TCAGCCCGGC GAGAACCCCT GA
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| Protein sequence | MTLSELRYVV AVADRRHFGR AAEACHVSQP SLSVAIRKLE DELGVTLFER GRGEVSVTPA
GEQIVTQARR VLTEVEHLRA VAVQSQDQLA GPLRLGAIYT IGPYLLPELI PVLRERAPRM
PLVIEENYTD RLRERLKHGE LDAIIISLPF EEPGVVTLPL YDEPFVAVLP GGHPLQDKKT
LTLEDMADAT LLMLGAGHCF RDQVLERCPA CQRTVTADGS TPRNMEGSSL ETIRHMVASG
MGVTILPCTA VGADRYAQRL LAVRRFEDPA PSRRVALAWR TSFPRPEAIE ALRQAILATA
LTCVDFIQPG ENP
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