| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2335 |
|---|
| Symbol | |
|---|
| ID | 8808116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2457589 |
|---|
| End bp | 2458425 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF980 |
|---|
| Protein accession | YP_003461561 |
|---|
| Protein GI | 289209495 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGATA CGCCCCACTA TCCGTTGCGC GGCCTGCTCA AACGGCTGAT CGAGCCCTTT
GCGACCGGCC ATGGCGGCCG CGTGCCACTC GGCCCCGATG AATGGGAGAC CCTGCGCCGC
CAGGTTCCGT TCATCGCGAC GCTCACGCCC GAGGAAGCCG AACGCCTGAA GGGGCTGGTA
GAAGAGCTGC TGGGCACCCG CGAGTTCGTG GGCATCGAGT CCGAGCCGAC CCCCGGCCAG
TGCCGCATGA TCGCGGCCTA CGCGGCACTG CCAGTCCTGG AGCTGGGGCT CGCCCCCTAC
CGCGACTGGC GCACGCTGGT GCTATACCCG GACACCTTCG TGCCGGAACA CGAATGGGTG
GACGAGGATG GCATCGTGCA TCAGGGGGCC ATGCCGCAGT CCGGCGAGGC CTGGGAGCGC
GGACCGGTCA TCCTGTCCTG GGCCGATGTC GTTCGCGACG GTGCCGTCGT GGTGCACGAG
ATGACCCACG TGCTGGATGC CGGCAACGGC GACGTGAACG GCTTTCCGCC GCTGGCGCGC
GATCACTCCG CCGCAGACTG GACCCGCGAC TTCACCGCAG CCTACGAGGC ACTTGTCGAG
GCCGTGGAAA ACGACGTCCC GGAAGACCAG CTACCGCTGG ACCCTTACGC CGCGACCGCC
CCGGAGGAGT TCCTGGCCGT GGCCGCGGAG GCCTTTTTCT TCGAGCCGCA AGGGCTGCGC
GAGGCCCTGC CGGCGGTCTA TGATCATCTG GTCCGGTATT TTCGCCAGGA ACCGCACCGT
CGCGCGGCGG CCATCGCCAC GCAAGGGACC CACTTGCCAC ACGAGATCTC CGCATGA
|
|---|
| Protein sequence | MHDTPHYPLR GLLKRLIEPF ATGHGGRVPL GPDEWETLRR QVPFIATLTP EEAERLKGLV
EELLGTREFV GIESEPTPGQ CRMIAAYAAL PVLELGLAPY RDWRTLVLYP DTFVPEHEWV
DEDGIVHQGA MPQSGEAWER GPVILSWADV VRDGAVVVHE MTHVLDAGNG DVNGFPPLAR
DHSAADWTRD FTAAYEALVE AVENDVPEDQ LPLDPYAATA PEEFLAVAAE AFFFEPQGLR
EALPAVYDHL VRYFRQEPHR RAAAIATQGT HLPHEISA
|
|---|
| |