Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2302 |
Symbol | |
ID | 8808082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2420918 |
End bp | 2421730 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | Domain of unknown function DUF1791 |
Protein accession | YP_003461528 |
Protein GI | 289209462 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.162762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0557387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGAAC ACCGTCTCAA TGCGCAGGAT CGCCCCAGCG AGGAGATTCT CAATGCGTTC GTCGATGGCG AATTCTCGCC CGAGGATCGC CTCAATACAC TGAAGCTGAT CTCCTCCAGC GAGCGCCTGA GCCGAGAGGT CTGCGATATG CACCAGCTCA AGGAGCTGGT GGGCATGGCC TACGAGGACC TTCCCACGGC CCAGTCAGGC GGCGGACGCT GTCGTATCTC CCGATCATCA CGTACCCACT GGTTCCCGTC GATGGCGGCC GGGGTGGTGG CGCTCGTGCT GGGGTCCCTG GCGGGTTACG AGATTACGCG CGATGCCGGA TTCCTCGGGA GTGGCGAACC AACCGCCTGG ATCGGTGGTG ATGCCGGCGA GACGGCGCTG ATTGCCGGTA GCGATCAGGC CGATGGTTCC GCGCCGCAGG TCGTCGCGGC GACCGAGACT GACCAGATCC TGCTGCATAT CAACGAGGCC GACCCGAAAT CCATGGCCGA GCTGCTGGAC GACATCGAGG CGATGTACCG CGACGCGGCG GCCGATGGTC GCGAGCTGAA CGTGCAGGTC GTGGTGCACA ACAACGCGAT GGATTTCCTG CGCACGGACC GGGCTCCGTA TCCCGAGCGG GTTGCGGCGC TCAGCCAGGA GTATGCGAGC CTGCGTTTCA CGGCCTGCAC CCAGACCCTC GATCGTCTGG CCCGCGAGGA GGGTGGCACG GTGGACATCC TCCCGCAGGC CGAACGGATC GATTCCGGCG TAGCCGAGGC CGCGCGCCGT CAGGCCGAAG GCTGGATCTA CATCAAGGTA TGA
|
Protein sequence | MAEHRLNAQD RPSEEILNAF VDGEFSPEDR LNTLKLISSS ERLSREVCDM HQLKELVGMA YEDLPTAQSG GGRCRISRSS RTHWFPSMAA GVVALVLGSL AGYEITRDAG FLGSGEPTAW IGGDAGETAL IAGSDQADGS APQVVAATET DQILLHINEA DPKSMAELLD DIEAMYRDAA ADGRELNVQV VVHNNAMDFL RTDRAPYPER VAALSQEYAS LRFTACTQTL DRLAREEGGT VDILPQAERI DSGVAEAARR QAEGWIYIKV
|
| |