| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2287 |
|---|
| Symbol | |
|---|
| ID | 8808067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2407404 |
|---|
| End bp | 2408156 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003461513 |
|---|
| Protein GI | 289209447 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0455227 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGGCG ACTTTCCCGA TCATTTCTCG GCGGTGGCGG CGGCGTATGC CCGCCACCGC
CCGGACTACC CCGCCGATCT CTTTGACTGG CTGGCCGCGC GCACCCCGCA CCACGAACAG
GCCTGGGACT GCGCCAGCGG CAATGGCCAG GCCGCGCAGG GCCTGCAGCC TCACTTCTCC
CAGGTCGTAG CGACCGATGC CGCCCCAGCC CTGCTGGCCG CTCTGCCGGC GACAGCCGGG
ATCAACCGAG TAGCCTGCGC CGCCGAGGCC TGCGCACTGG CCGATACCTC GGTGGATCTC
GCCTGCGTCG CCCAGGCCGC GCACTGGTTT CGCCACGCCG AGTTCCATGA CGAGGTTGCA
CGCGTCCTGC GCCCGGGCGG CCTGCTGGCG ATCTGGGGCT ACGGCATCCT GCGCGCCGAG
GACCCGGCGC TGGACCGCCT GCTGACCGAC TTTCACGACA CCACCCTGGC GCCCTGGTGG
CCGGAAGAAC GCAGCCATAT CCGCAGCCAC TACCGCGACC TGCCGTTCCC CTGGCCGGAG
ATCGAGACGC CCGAGTTTCG GATCGACCGC GAATGGGGCC GCGACACCCT GCTCGGCTAC
CTCGGCACCT GGTCAGCCAT CCGCCGCGCG CAGACGGCCG GCCAGGATCC GCTGGCCGCA
CTGGAGCCAG CCCTGCACGC ACTGTGGCCG AACGCGGACA TCACCGCCCG CCTGCACTGG
CCGATCTTCC TGCGCGCCGG GCTGCGGCCG TGA
|
|---|
| Protein sequence | MAGDFPDHFS AVAAAYARHR PDYPADLFDW LAARTPHHEQ AWDCASGNGQ AAQGLQPHFS
QVVATDAAPA LLAALPATAG INRVACAAEA CALADTSVDL ACVAQAAHWF RHAEFHDEVA
RVLRPGGLLA IWGYGILRAE DPALDRLLTD FHDTTLAPWW PEERSHIRSH YRDLPFPWPE
IETPEFRIDR EWGRDTLLGY LGTWSAIRRA QTAGQDPLAA LEPALHALWP NADITARLHW
PIFLRAGLRP
|
|---|
| |