| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2284 |
|---|
| Symbol | |
|---|
| ID | 8808064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2405151 |
|---|
| End bp | 2405927 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_003461510 |
|---|
| Protein GI | 289209444 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0107952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGC GGAAGCATAC CATCATGGCT CATCCCCCTT CAGCCACGCC GGGGCAAACT
GGAGAGCGAT CGGGCGCGCT GCGTGCGCTG AGCGCCTGGG CGGCCCGGGC GCTGTATCCC
GACCACTGTG GCTTGTGTCT GGCCCCGTTG CCGGAGGGCG GGGCCATCTG TCCTGCCTGC
CGCAAGGACC TGGTGCGGGT GGAGGCCCCG TGCCCGGGTT GCGCGGCACC CCTGCCGGCG
ACAGTGGCCT GCCCCGCCTG TCAGCGCCGC CCTCCGGCAG TAGACGCCCT GCGGGCGCCA
TGGGCCTATG CCTGGCCGCT GGATCGGGTG CTGCTGGCCT ACAAGCGCAG CGGCCACGCC
CGCGCTGAAC GGATCCTCGT GGACCTGGCC GCACAGGCAG CCCGCGAACG CCGGGATGTG
CCGACACCGT TGCCTACCCG CGTGGTGCCC GTTCCATTGC ACCCCTCGCG CCTGCGCGAG
CGCGGGTTCA ATCAGTGCGA GCCGCTGGCG CGGTGCGTCG CCGAGGTCCT GGGGCTCCCG
CTGGATACCG CATGCGTTCG CCGCGTACGG GCCACGCCTT CGCAGCAGAC GCTGAGCGGT
CCACAGCGGC GCCGGAACCT GCGCGATGCA TTTGCCGTGA ACGCGGAGTT GGCGGGCGAG
CGGGTGCTGC TGGTGGACGA TGTGGTCACG ACCGGGGCGA CCCTGGATGC GCTGGCCCGT
GCGCTGCGGG CGGCGGGAGC GGCATCGGTC GAGGGTCTGG CGCTTGCCCG CGCGTAA
|
|---|
| Protein sequence | MQKRKHTIMA HPPSATPGQT GERSGALRAL SAWAARALYP DHCGLCLAPL PEGGAICPAC
RKDLVRVEAP CPGCAAPLPA TVACPACQRR PPAVDALRAP WAYAWPLDRV LLAYKRSGHA
RAERILVDLA AQAARERRDV PTPLPTRVVP VPLHPSRLRE RGFNQCEPLA RCVAEVLGLP
LDTACVRRVR ATPSQQTLSG PQRRRNLRDA FAVNAELAGE RVLLVDDVVT TGATLDALAR
ALRAAGAASV EGLALARA
|
|---|
| |