Gene TK90_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2283 
Symbol 
ID8808063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2404276 
End bp2405145 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content66% 
IMG OID 
Product4-hydroxybenzoate polyprenyl transferase 
Protein accessionYP_003461509 
Protein GI289209443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00642168 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGCAC GTGCACGCCT GTGGGAACTG GCCCGACTGG TCCGCCTGGA CCGACCTGTC 
GGCATCTATC TGCTGCTGTG GCCGACCCTG TGGGCGCTCT GGATCGCAGC CGAGGGCTGG
CCGCCGGGTT CGCTGATCTT CATCTTCGTT GCCGGCGTCG TGCTGATGCG CTCGGCCGGC
TGTGCGATCA ACGACTACGC GGACCGCGAC TTCGACGCCC ATGTCGCCCG TACGCGCGAC
CGCCCGCTGG CGCTGGGCAC GATCACCCCG AACGAGGCAC TGGCGACCTT CGCCGTGCTG
GCCCTGACCG CCTTCGTGCT GGTCCTGTTC ACCAACCTGC TGACCATTCT CTATTCCCTG
GTCGCGGTGG TGCTGGCCGC TACCTATCCC TTCGCCAAGC GCTTTCACCA CTTTCCGCAG
GTGCACCTGG GCGCGGCCTT CGCCTGGGCC GTGCCCATGG CCTTTACCGC GGTCACCGGG
GATCACCCGC CGCCGCTCGC CTGGCTGCTG TACGTGACCG TGCTGGCCTG GACCGTGGTG
TATGACACCT TCTACGGGAT GGTGGACCGA GAAGACGACC TGAAAATCGG GGTGAAGTCC
ACCGCCATCG CGTTCGGCGA GATGGACCGT CTGATCACCG CGGGGCTCCA GGTGCTCGTC
TGGCTGGGGC TGTACCTGAT CGGCCAGCAT GCCGGGCTCG GCGGCTACTA CACGGCGGGG
CTGGTGATCG TGGCGATGCT GATGTTCTAC CAGCAGTTCC TGATCGCCGA ACGCGAGCCG
ACCGACTGCC TGCGGGCATT CAAGAACAAC CATTATCTCG GTGCCGTGGT CCTGCTCGCG
ATGATCGCAG ACCATCATCT GGGGGGCTAA
 
Protein sequence
MDARARLWEL ARLVRLDRPV GIYLLLWPTL WALWIAAEGW PPGSLIFIFV AGVVLMRSAG 
CAINDYADRD FDAHVARTRD RPLALGTITP NEALATFAVL ALTAFVLVLF TNLLTILYSL
VAVVLAATYP FAKRFHHFPQ VHLGAAFAWA VPMAFTAVTG DHPPPLAWLL YVTVLAWTVV
YDTFYGMVDR EDDLKIGVKS TAIAFGEMDR LITAGLQVLV WLGLYLIGQH AGLGGYYTAG
LVIVAMLMFY QQFLIAEREP TDCLRAFKNN HYLGAVVLLA MIADHHLGG