| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2281 |
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| Symbol | |
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| ID | 8808061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2402566 |
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| End bp | 2403414 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003461507 |
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| Protein GI | 289209441 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.010499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGC CGCGCCCCGA TCGTTATGGC GTGGTCGGCA ACCCGATCCG CCATTCGCTG
TCGCCGCGCA TCCATGCCCT ATTCGCCGAA CAGACCGGGC AGCACCTGAC CTACGAGGCC
CTGCTCGGCA CCCCGGGGCA GTTCGCCGAG GAGGTCTGGG CATGGTTCTC CTCCGGGTTC
CGCGGCCTGA ACGTGACCGT CCCGTTCAAG GAAGAGGCGT TCGCCCTGGC CCGGGTCCTG
ACCGACCGCG CCCGGCGCGC CGGCGCCGTG AACACCCTCT GGCGCGACGA CGAGCGCCAG
CTCCACGGCG ACAACACCGA CGGCATCGGC TTCTGCCGCG ACCTCGACCG CCTGGGTGGC
GAGGTGCCCG GCCGGCGCAT CCTGATCCTC GGGGCCGGCG GCGCGACCCG CGGGCTGCTG
CAGCCCCTGC TGGAGCGCCA CCCCGCACAG CTGGTGATCG CCAACCGCAC TGCGGCGCGG
GCCGAGGCAC TGGCCGAGGA CTTCGCCGAC CTGGCGATCG ATACCGAGCT CTCCGCCTGC
GGCCTCGACG CCCTGCCCGC CGGCCCGTTC GATCTGGTCA TCAACGCCAC CGCCGCCGGC
CTGTCCGACG CGGGCCTGAA CCTGCCCGCG ACGCTGGTGC ACCCGGACAG CCTGGCCTAC
GACCTGGTCT ACGGCCCCGG TGCGGCCCGG TTCCTTGACT GGGCCCGGGA TGCTGGCTGC
CGGCAGACGT CGGACGGCCT GGGCATGCTG GTCGAGCAGG CCGCCGAGGC CTTCGCGACC
TGGCGCGGCA TCCACCCCGA CACCACCCCG GTATTGCGCC AACTGCGTCA CGAAAACGAC
ACGGCCTGA
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| Protein sequence | MSEPRPDRYG VVGNPIRHSL SPRIHALFAE QTGQHLTYEA LLGTPGQFAE EVWAWFSSGF
RGLNVTVPFK EEAFALARVL TDRARRAGAV NTLWRDDERQ LHGDNTDGIG FCRDLDRLGG
EVPGRRILIL GAGGATRGLL QPLLERHPAQ LVIANRTAAR AEALAEDFAD LAIDTELSAC
GLDALPAGPF DLVINATAAG LSDAGLNLPA TLVHPDSLAY DLVYGPGAAR FLDWARDAGC
RQTSDGLGML VEQAAEAFAT WRGIHPDTTP VLRQLRHEND TA
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