| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2279 |
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| Symbol | |
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| ID | 8808059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2400601 |
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| End bp | 2401530 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | Coproporphyrinogen oxidase |
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| Protein accession | YP_003461505 |
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| Protein GI | 289209439 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.591559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0202052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG ACCACGTCTC CATCGACCGT GTCATCGACT ACCTGCAGGG CCTGCAGGAC
CGCATCTGCC AGGGTCTCGA GGGCCTGGAC GGCCAGGCCC GCTTCCAGGA GGACGCCTGG
GAACGCCCGG CCGGCGGCGG CGGCCGCACC CGTGTAATGC ACGAGGGGCG GGTCTTCGAG
CAGGCCGGGG TCAACTTCTC CCATGTGATG GGCGACAACC TCCCGGCCTC GGCCACCGCG
CACCGCCCGG AGATGGCCGG ACGCTCGTTC CAGGCCACCG GCGTGTCGCT GGTGATCCAC
CCGCACAACC CGTATGTGCC GACCTCGCAC GCGAATGTGC GCTTCTTCAT CGCGGAGAAG
CCCGGCGAGG AGCCGATCTG GTGGTTCGGC GGCGGCTTCG ACCTGACCCC GTACTACGGT
TTCGACGAGG ACTGCATCCA CTGGCACCGC ACGGCCGAGG CCGCCTGTCG TCCGTTCGGC
GAGCACCTCT ACCCGGCGCA CAAGCAGTGG TGCGACGAGT ACTTTCATCT CAAGCACCGC
GACGAGCCGC GCGGCGTCGG CGGGCTGTTC TTCGACGACT TCAGCGAGGG CGGCTTCGAG
CACGCCTTCG GCTACATGCA GAGCGTCGGC AATGCCTATC TGGATGCCTA TGGCCCGATC
GTCGAGCGTC GCCACGCGAC CGAATACGGC GAGCGCGAGC GCCAGTTCCA GCTCTACCGG
CGCGGGCGCT ATGTCGAGTT CAATCTGGTC TACGACCGCG GTACCCTGTT CGGCCTGCAG
TCGGGCGGGC GCACCGAGTC GATCCTGATG TCGCTGCCGC CGCTGGTGCG CTGGGAATAC
AACTACCAGC CGGAGGCCGG CACGCCCGAG GCCGAACTCT ACGAGCGCTA TCTGAAGCCG
CGCGACTGGC TGGCCGAGTC CGCCGGCTGA
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| Protein sequence | MSQDHVSIDR VIDYLQGLQD RICQGLEGLD GQARFQEDAW ERPAGGGGRT RVMHEGRVFE
QAGVNFSHVM GDNLPASATA HRPEMAGRSF QATGVSLVIH PHNPYVPTSH ANVRFFIAEK
PGEEPIWWFG GGFDLTPYYG FDEDCIHWHR TAEAACRPFG EHLYPAHKQW CDEYFHLKHR
DEPRGVGGLF FDDFSEGGFE HAFGYMQSVG NAYLDAYGPI VERRHATEYG ERERQFQLYR
RGRYVEFNLV YDRGTLFGLQ SGGRTESILM SLPPLVRWEY NYQPEAGTPE AELYERYLKP
RDWLAESAG
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