Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2271 |
Symbol | |
ID | 8808051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2391486 |
End bp | 2392841 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | sun protein |
Protein accession | YP_003461497 |
Protein GI | 289209431 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.00558383 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAGGCA AGCGCGCCGG ACGCATCGTA CCCTCGCGGG TGGACTCGCG CTCCCCGCGC CAGCGGGCGC TGGAGGCGGC CGAGGGGGTC GTACTGCAGG GGCATTCCCT GACGCGTGCG GTCGAGCACG CAACCGAGGG GCTGAACGCC CGCGACGCGG CCTGGGTGCA GGCGCTGGCC TACACTACGC TGCGCTGGTA TCCGCAGCTG TCGGCGCTGG TGAACGGGTT CCTGGAGCGC CCGCTGCGCA AGAAGGACGC GGTGATCGGT GTGCTGCTGG CCCAGGGGCT GGCCGAGCTC ATGCATTTCT CCACCCGGGA CCACGCGGCG GTGCGCGAGA CCGCGGAGCT GGCGAGGGCC ATCCATCGCC CCGGTGCGGT GGGGCTGATC AATGCGGTCC TGCGGCGCGC GCAGCGCGAG CAGGATGCGC TGGAGGCGGC AGTCCGGGAA GACCCGGCGC TGCGTTTCGC CGTTCCGGAA TGGCTGCTGG AGACGATCCG CGCCTCCTGG CCCGACGACT GGGAGACGTT GCTGGAGGCG GCCACCCGTC CCGCACCCAT GACCCTGCGC GTGAACCTGT CTCGCACCTC GCGCGAGGAG GCCCTTCAGG CGCTGGTCGC GGCGGGACAC CCGGCACAGG CGCATCCTCA GCTGGAGGCG GCCCTGACCC TGGACGAACC CGCCGACGTC GCCCAGCTGC CCGGTTTTGC CGAGGGCCGG CTCTCGGTGC AGGACGCCTC CGCGCAGTGG GCGGCGGTGC TGCTCGATCC GCAGCCGGGC GAACGCGTGC TGGACGCCTG CGCGGCCCCG GGTGGCAAGA CCGGTCATCT GCTGGAACGG GCGGGTGGTG ATCTCCAGCT CACTGCGCTG GACAGCGACG CCGAGCGCCT GGTGCAGGTG CGCGAGAACC TCGACCGCCT GGGCTTCGCC GCGCAACTGA CCGCGGCCGA TGTCGCCGAT CCCGACGCCT GGTGGGATGG TCGGCCCTTC GATGCGATCC TGCTCGATGT CCCCTGCTCG GCGACCGGGG TGATCCGGCG TCACCCGGAC ATCAAGACCC TGCGCCGTGC CGACGACATC CCGCGCCTGG CGGCGGAGCA GGCGCGCATT CTGGAGGCCG CCTGGGGGCT GCTGCGCCCT GGCGGGCGCC TGCTGTATGC GACCTGTTCG CTCCTGTCGG AGGAGAACGA CGCGGTGGTC GCAGGCTTTC TCGAGCGGAT GCCGGATGCC CGAGCGCTGG AGCCCGAGGG TGGTCCACCG ATCGCCGGCG CGCACGCACG CTCGGTCGGC TGGGCGCTGC CGCTGGGCCT GGAAGGCGGC GATGGCTTCT ACTACGCGTT GTTGACAAAG GATTAG
|
Protein sequence | MAGKRAGRIV PSRVDSRSPR QRALEAAEGV VLQGHSLTRA VEHATEGLNA RDAAWVQALA YTTLRWYPQL SALVNGFLER PLRKKDAVIG VLLAQGLAEL MHFSTRDHAA VRETAELARA IHRPGAVGLI NAVLRRAQRE QDALEAAVRE DPALRFAVPE WLLETIRASW PDDWETLLEA ATRPAPMTLR VNLSRTSREE ALQALVAAGH PAQAHPQLEA ALTLDEPADV AQLPGFAEGR LSVQDASAQW AAVLLDPQPG ERVLDACAAP GGKTGHLLER AGGDLQLTAL DSDAERLVQV RENLDRLGFA AQLTAADVAD PDAWWDGRPF DAILLDVPCS ATGVIRRHPD IKTLRRADDI PRLAAEQARI LEAAWGLLRP GGRLLYATCS LLSEENDAVV AGFLERMPDA RALEPEGGPP IAGAHARSVG WALPLGLEGG DGFYYALLTK D
|
| |