Gene TK90_2269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2269 
Symbol 
ID8808049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2388422 
End bp2390632 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content67% 
IMG OID 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_003461495 
Protein GI289209429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00414095 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGATCAGCG TTTCCCTAAG ACGCTTCCCA TGGGGCCTGC TGGGCATGGG CCTGCTGTTC 
CTGCTGCTGC TGACCTCGCT GGTGGTCATG GGCGGGGCGG CGCAGGACCA GGCCCGCTTC
GAGCAGCTGT TCCTGTGGCT GCTGGTATTC CACGCCGCGA TCCTGCTGGT ACTGGGTGGC
CTGATCGTCC ACCAGGTCGT CCGCATGGTT GCTCAGTATC GCCAGGGCGT TCCCGGCAGC
CGCCTGACGC TGCGGCTGGT CGGGGGGTTC ATGCTGGTCG CGGTGCTGCC GGTGTCGGTC
GTCTATTACT TCTCCTTCGA GTTCCTGAAC GAGGGCGTGG ATTCGTGGTT CGACGTGCGC
GTGGACTCTG CGCTGGAGGA TGCCCTGGAG CTGTCGCGTT CGTCGCTGGA TCTGCGTGTG
CGCCAACTGG CGACCGAGAC GCAGGAGATG ATGAGCGAGC TGGAAGGGGT CTCGGAGGGC
CTGGTTCCGC TGGCGTTGAA TGACTACCGC CGTCAGGTTG GGGCCCAGGA ACTGACGCTG
GTCGGCTCCA ACAACCGCAT CATTGCCTCC TCCACCGACA GCCCGATCCG CCGCCTGCCC
AGTCCCCCGG GGGCCGATAT CCTGATGCGC GTGCGCCCGG AGCAGCCGTA TTCGCGCCTG
GAACCGCAGA CCGACGGCTC GCTGGTCATC CGTGTGGTGG CTACCACCAG CAGTCGAAGG
CCGGGGGCGG AGAACCGCAT CCTGCAGGGG ATCTACCCGG TCGACCCGCG CATGTCGGCC
CTGTCGCAAC GCGTGGAGGA CGCCTTTGCC GGCTACCGCG AGTTCGCCTA CCTGCGCGGC
CCGATCATCC AGGGCTTTAT CTTCACCCTG TCGCTGGCGC TGGCGATCTC GCTGATGGCG
GCCCTGTGGG CCGGGCTGCT GGTGGCGCGG CGCATGGTGC GTCCGATCTC CGATCTGGTG
CAGGGGACAC GGCTGGTGGC CGCTGGCGAC TATTCCACCC GGCTCGCGGT GCAGCGGGCG
GACGAACTGG GCTTTCTGGT GCAGTCGTTC AACGCCATGA CGCGCACGTT GAACGAGGCG
CGTGACGAGG CCGAGCGCAA CCGCCGCCTG CTGGATGCCG AGCGCGCCTA CCTGGAGAGT
GTCCTGCAGC ACCTGCGTTC CGGCGTGCTC GCGCTGGATG GCAGTCTGCG CCTTCGCACC
GCGAACGAGG CCGCCGGCCA GATCCTGGAG TGCGACCTGC AGGGCGCCCG TGCGCGTCCG
ATCTCCGAGC TGGGCGCCGA GTGTCCGCTG GTCGGGCAGT TTTTCGAGGC GATCAACGAT
GCCCTGGCGC GCCAGGAAGA CGAGTGGTCG CGGCAGGTCG TCGTGTTTAC CCGTTCCGGG
CGCAAGGTGC TGATGACGCG TGCCGTCTGG CTGCCAACCT CGGGCTCCAG TCGCGGCCTG
CACGCGATCG TGTTCGATGA CATGACCGAG TTCCTGAAGG CGCAGCGCGA TGCCGCCTGG
GGCGAGGTGG CCCGGCGTCT GGCACACGAG ATCAAGAATC CGCTGACCCC GATCCAGCTA
TCCGCCGAGC GTCTGTCGCG CCGGTTGGGC AAGGTCCTCG ACGGGGCCGA CCGCGATGTC
CTGGATCGCG CGACCGGCAC GATCATCCAG CAGGTGGAGG CGATGAAGAC GCTGGTCAAC
GCCTTCCGCG ATTACGCTCA GGCCCCGCGA CTGGAGCTGG GATCGGTGGA CCTGAACCAG
CTGATCCAGG ATGTCTGCGA GCTGTATGTC GATTCCGACG GCCATTCCCG TGTGCAGACC
GACCTCGAGC CGGATCTGCC CGGGATTCGG GGCGACGCCG GACGCCTGCG ACAGCTGCTG
CACAACCTGA TCAAGAACGC GCTGGAGGCC GGCAAAGACC AGGAGGCCTT CGTGGTGCAT
ATCGCCACTG CCTATCTGGA CGATCCGACT GGGCCGCATA TCGAGCTGCG GGTGACCGAC
ACGGGCCCGG GGATCAAGCC CGAGCTGCTG GAACGCATCT TCGAGCCCTA CACCACTGAC
AAGCCGCGTG GAACCGGTCT CGGTTTGGCG GTCGCGCAGA AGATCGTCGA GGAACATGGC
GGCATGATTG AGTGCCATAA TGAACCGGCG GGCGAAGGTG GGGCGGTTTT CCGCATTCGC
ATCCCGGTCG AACATACCCC GCAGGCCCTG GCCCACGAGG AACCGGAATG A
 
Protein sequence
MISVSLRRFP WGLLGMGLLF LLLLTSLVVM GGAAQDQARF EQLFLWLLVF HAAILLVLGG 
LIVHQVVRMV AQYRQGVPGS RLTLRLVGGF MLVAVLPVSV VYYFSFEFLN EGVDSWFDVR
VDSALEDALE LSRSSLDLRV RQLATETQEM MSELEGVSEG LVPLALNDYR RQVGAQELTL
VGSNNRIIAS STDSPIRRLP SPPGADILMR VRPEQPYSRL EPQTDGSLVI RVVATTSSRR
PGAENRILQG IYPVDPRMSA LSQRVEDAFA GYREFAYLRG PIIQGFIFTL SLALAISLMA
ALWAGLLVAR RMVRPISDLV QGTRLVAAGD YSTRLAVQRA DELGFLVQSF NAMTRTLNEA
RDEAERNRRL LDAERAYLES VLQHLRSGVL ALDGSLRLRT ANEAAGQILE CDLQGARARP
ISELGAECPL VGQFFEAIND ALARQEDEWS RQVVVFTRSG RKVLMTRAVW LPTSGSSRGL
HAIVFDDMTE FLKAQRDAAW GEVARRLAHE IKNPLTPIQL SAERLSRRLG KVLDGADRDV
LDRATGTIIQ QVEAMKTLVN AFRDYAQAPR LELGSVDLNQ LIQDVCELYV DSDGHSRVQT
DLEPDLPGIR GDAGRLRQLL HNLIKNALEA GKDQEAFVVH IATAYLDDPT GPHIELRVTD
TGPGIKPELL ERIFEPYTTD KPRGTGLGLA VAQKIVEEHG GMIECHNEPA GEGGAVFRIR
IPVEHTPQAL AHEEPE