| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2263 |
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| Symbol | |
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| ID | 8808043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2381930 |
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| End bp | 2382772 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_003461489 |
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| Protein GI | 289209423 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0543094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGG GCGATACCAT CCACAAGCTG GCCCGGGTGC TTGGTCCGGC GTTGGCTGGT
GCCCCCCTGG AGTCGGTGGC GACGCGCGCG CGGCGCGGTG CGGTACTGGT GGAGCATGGG
GCGATGACCG TGCGTAGGGT GAGCGCTCGT GGCAAGCATC TGCTGATCGC GCTGGAGGAT
GCCGCGGGCC GGGCCTGGCG CCTCCGCACG CATTTGGGGA TGTACGGGAC CTGGCACCAG
TACGCGCCCG GGGCGGCCTG GCACAAGCCG GACCATCAGG CCTGGGCCGT GCTGCGCCTG
GCGGACCGAG TGCTGGTCTG TTTCCATCCG CGTGAGCTCG CCTGGCAGTT ATTGTCGGAG
GGGCGAGCCG ATCCGGAGCG ACTGGACGCG CGGGTAGGGC CGGATCTTCT GGATGCGACT
GTGGAGCTGG ATGAGGTCGT CCAACGCATC CGCACGAACT GTGATCCCGC GCGGCCGATC
CTGGATGTAC TGCTCGATCA GTCGCTGGCG GCGGGCATTG GCAACATCTA CAAGTCGGAG
GTGCTGTTCC TGCAAGGCCG GTACCCGCTG ACGCCGGTCG GCGCGATCAC GGATCGCGAC
TTGCTGGATA TCTACTGCGA TTCCGCACGT CTGTTGCGAC GCAACCTGAA GCCAGGGCCG
CGCATTACGC GCGCGCGGGC CGAGACGGAC GAGTACCTGC ATGTGTACGG GCGTGGGGGC
CAGGCCTGCC GGACGTGCGG GACGCCAGTG GAACGGGCGT TACTGGGCGA GCACCTGCGC
GCCACCTACT GGTGCCCCTC CTGCCAGCCG GGGAACCTCG ACAGGCCCCG CGACCACCAA
TAA
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| Protein sequence | MPEGDTIHKL ARVLGPALAG APLESVATRA RRGAVLVEHG AMTVRRVSAR GKHLLIALED
AAGRAWRLRT HLGMYGTWHQ YAPGAAWHKP DHQAWAVLRL ADRVLVCFHP RELAWQLLSE
GRADPERLDA RVGPDLLDAT VELDEVVQRI RTNCDPARPI LDVLLDQSLA AGIGNIYKSE
VLFLQGRYPL TPVGAITDRD LLDIYCDSAR LLRRNLKPGP RITRARAETD EYLHVYGRGG
QACRTCGTPV ERALLGEHLR ATYWCPSCQP GNLDRPRDHQ
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