| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2240 |
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| Symbol | |
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| ID | 8808020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2357582 |
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| End bp | 2362102 |
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| Gene Length | 4521 bp |
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| Protein Length | 1506 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | DEAD/H associated domain protein |
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| Protein accession | YP_003461466 |
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| Protein GI | 289209400 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.589998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTCT CGCCCTTTCG TCCCGCGACC GACACCTGGT TTGGCGAGGC CTTCGGGCAG
GCGACCACCA TCCAGTCCCG GGGCTGGCCC GCGATCCGGG CCGGCCGCCA CTGCCTGCTG
ATCGCGCCCA CCGGCAGCGG CAAGACGCTC GCCGCGTTCC TGAGTGCAAT CGACCGCCTG
ACCGGCGAGC CGGCCCCGGA ACCCCGCACC GGCTACTCGG TGCTCTACAT CTCGCCGCTG
AAGGCGCTGG CCACCGACAT CGAGCGCAAC CTGCGCGCCC CGCTGACCGG CATCACCCAC
ACCGCCGCGC GCCTGGGTGA GCCGGCCCGC GAACCCGTGG TGCACATCCG CACCGGCGAC
ACCCCGCAGG CCGAGCGCCG TGCCCAGGCG CGCGAACCCG GCGACATCCT GGTGACCACG
CCGGAGTCGC TCTACCTGCT GCTGGGCTCG AAGGCCGCGG AGAACCTCGA GTCCGTCCAC
ACGGTCATCA TCGACGAGGT GCACGCCCTG GCCGGGAACA AGCGCGGCGC GCACCTGGCC
CTGTCGCTGG AGCGCCTGGC CGAACGCTGC GACCAGGACC CGCAGCGCAT CGGGCTGTCG
GCCACCGTGC ACCCGGTGGA GGTCGCGCGC GGCTTCCTCG GGGGCGACCG CGAGGTGGAC
GTGATCGACG CCGCGGAGCC CCCGCGCCTG GATCTGGAGA TCCTCGCCCC CGAGGAACCG
CCCGCCGAGC ACGCACCCGC CACCACCGAG ACACCGGAAC CGGCAAGCCC CATCCCGTCC
GGCTCCATTC TGGGCGCGGT CTACGGCCAG GGCACAGGGA AGCTCCCGGC GGCCGGTGGC
GACCGCGCCG CACGCCTGGA GCCGCGGCTG ATGGCCGCGA TCCTGGAGCA CCGCTCCACC
ATCGTGTTCG TCAACAGTCG CGGACTGTGC GAGCGCCTGG TCCAGCGCAT CAACGAGGCC
TGGCGCGAAC AGCAGCCGGA GGATGCCGAA CCGGTGGAGG ACCTGGTCGC CGCCCACCAC
GGCAGCGTGT CCCACGAGCG CCGCGCCGAG ATCGAGGGCC GACTGAAGAC CGGGCGCCTG
CGCGGCATCG TCGCGACCAG CTCGCTGGAG CTGGGCATCG ACATGGGCGC GGTGGACCTG
GTGATCATGG TCGAGTCCCC CGGCGCCGTC GCCCGCGGGC TGCAGCGCGC CGGCCGTGCC
GGGCATGGCG TGGGTCAGGT CTCGCGCTCG CTGCTGCTGC CGCGCTTTCG CGGCGACCTG
CTCGAATGCG CGGTGATCGG CGAGCGCATG CAGGCCGGCG CACTGGAGCC AATCCATGCC
CCGCACAACC CGCTGGACGT GCTCGCCCAG CAGCTCGTCG CGATGGTCTG CGAACGCCCG
CGCACGGTGG ACGAGCTGCA CGCGCTGATC CGCCGCGCCG CGCCCTGGCG CGAGCTGTCG
CGCGCGCTGC TCGAGGCCAC GCTGGACATG CTCTCCGGCC ATTACCCCAG CACCGACTTC
GCCGACCTGC GCCCCTGGCT CGCCTGGGAC CGCGCCCGCG ACGCGCTGAC CCCGCGCCGG
GGGGCGGCGC TGGCCGCGCG CCTGAACGCC GGCACCATCC CCGACCGCGG CCTGTACGGC
GTGCATGTCG GCGAGGGCGG CCCGCGCATC GGCGAGCTGG ACGAGGAGAT GGTGTTCGAG
CTGAAGACCG GCGAGAACGT GACCCTCGGC GCCAGCACCT GGCATGTGGA GGCGATCACC
CGCGACCGCG TGCTGGTCTC CCCCGCCCCC GGCGAGGTCG GCAAGCTGCC GTTCTGGCAT
GGCGACGGCC CCGGCCGCCC GATCCAGCTC GGCCAGGCCA TCGGCGCCGC CACCGAGCGG
CTGGCGCACA TGGACCGCGC CGAACGCACG GCCTGGCTCA GGGAACACGC GCCACTGTCG
GAGGCGGCGG TCGAGACCCT CTGCGACTAC ATCGACGAGC AGCGCGAGGC CACCGGGCAG
CTACCCTCGG ACCGGCGCAT CGTGGTCGAG CGCTTCCGCG ACGAGGTCGG CGACTGGCGC
GTCTGCATCC TGACGCCGTT CGGCGCGCGC GTGCACGCCC CCTGGGCGCT GGCCCTGCAG
GGCGCGCTGA CCAGCACCTC CGGCTTCGAG GTGCAGGTGA TGTACACCGA CGACGGCATC
GTCCTGCGCC TGGCCGACAG CGAAGACCTG CCTGAACTCG ACAGCCTGTT CCCGGACCCG
GAGGAGCTGG AGGAGGCCGT CACCCGCGAG CTGGGCCACT CCACCCTGTT CGCCAGCGCC
TTCCGCGAGA ACGCGGCACG GGCCCTGCTG CTGGTGCGCA ACCGCCCGGG CCAGCGCACG
CCGCTGTGGG CGCAGCGGCT GAAGTCGCAG CAGCTGCTGG CCTCGGTGCG CGAGTACGCG
AGTTTTCCGG TGGTGCTGGA GACCTACCGC CAGGTGCTGG CCGACGTGTT CGACCTGGAC
GCCCTGCGCG AGATCCTGCG CGGCGTGCAG GAACGGCGCA TCCGCGTGCA CGAGGTGGAG
ACGCCGCAGG CCTCGCCGTT CGCGCGCAGC CTGGTGTTCG CCTATGTCGC GGCCTACATC
TACGAGCAGG ACGCGCCGAT GGCCGAGCGC AAGGCCCAGG CGCTGACGCT GGACCGCGGC
ATGCTGGCCG AACTGCTGGG CCAGGCCGAG CTGCGCGAGC TGATCGACCC CGAGGCCCTG
GCCGAGCTGG AGGCCGAGCT GGCGCACGCC ACCGAGGCGA CCCGGGTGCC GGACGCCGAC
GCCCTGCACG ACCTGCTGCG CCGGCGCGGG GACCTGACGC CAGACGAGGT CGCAGCCGCC
TGCGCCGAGG CGCCGGGGCC GTGGCTGGAA CAGCTCGCGC GCTCCCTGCG CGCGGTGGAG
GTGCGCATCG CCGGCGAGCC GCGCTGGATC GCGGCCGAGG ACGCGGCGCT GTACCGTGAT
GCCCTCGGCG TGGTGCCCCC GCCCGGCCTG CCCGCCGCCT TCCTGGAACC GCCGCAGCAC
CCGCTGGAAC AGCTGCTCCG CCGCTACGCC CGTACCCACG GTCCGTTCCG CAGCGAGGAC
CTGGGCGCAC GCTATGGCCT CGCGCCGGGC GCACTGCTGC CGGCGCTCGA GAGCCTGGAG
CGCGCCGGCG TGCTGCTGCG TGGCGAGATC CGCCCGCAGG GCACGGGCGA GGACTGGTGC
GAACTGGACA TCCTGCGCCG GCTGAAGCGC CGCACCCTGG CCCGCCTGCG CGACGAGGCG
GCGGCGGTGG ATGCCCGCGC ACTGGGCCGC CTTCTGCCCG CCTGGCAGGG CCTGACCGAG
CCCGGCCGCG GCGCCAGCGC CCTGCGCGAC ACGTTGACCC AACTGGAGGG CATCGCCCTG
CCCTGGTCCG CCTGGATCGC CCACGTGCTG CCGATGCGGG TGCGCGACTT CTCGCTGGAT
GCGCTGGACC GCATCACCGC CTCCGGGGAG TTCGTCTGGG TGGGTGCCGG CGCGCTGGGC
CAGCGCGACG GGCGCATCCG CTTCCTGCGC CGCGAACAGG CGATGGTGCT GCTGGAGCCG
GAGGCCGATG CCGCGGATAC CCCGGCCAGC GACGACCCGC TGGCACAGGC GATCCTGGAG
ACCCTGGACC GGCGCGGCGC CTGCTTCTAC ATGGAGCTGG AGCGCGCGGC CCGCAGCGCA
CAGCCGGACG CCCGCCAGGA CGCGATCGAG GCCGCGATCT GGGATCGGGT CTGGGCCGGG
CAGATCACCA ACGACACCTT CGCTCCGCTG CGCAGCCTGG GCCAGCGCAA GACCTCCGCC
CGAGGTCGCC GACGCCCGGG CCAGGGCCTG GCCGGCGGGC GCTGGTCACG GGTCGCGGAT
CTGATCGACC CCGACGTGTC GCTGACCGAG CGCGCCCGCG AACAGGCCGA GAACCTGCTG
GCGCGCTACG GCGTGGTCAG CCGCGAGATG GCCCGCGCCG AGGGCCTGCC CGGCGGCTTC
GGGCGCGTGT ATCCCGTCTA CCGCGCGATG GAGGACGCCG GCAAGCTGCG GCGCGGCCAC
TTCGTCGAGG GCCTGACCGG CGCGCAGTTC GCCCGCGCCG GCGCGGTGGA TCGCCTGCGC
GCGCTGGAAC GCGCGGCCGA CGACACCCCC GAACCGCAGT GGCTGGCCAG CGTCGACCCG
GCCAACCCCT GGGGCCAGCT CCTGCCCTGG CCGCAGCCCC CGGAAGCGGC CGAGGGCCGC
CTGCGCCGTG TCGCCGGGGC GCTGGTCGCG CTGGCCGGCG GCCAGCCGCT GCTCTATCTC
GCCGCCTCGG GCCGCCAGCT GTTCGTCTGG GAGGCGATCC CCGGCATCGA CACCGCGGAG
GAACACGCCG CGCTGGTAAC CGAGGCCATC CGCCAGCTCG CCGGGAGCCG CTGGCTGCCG
AAGCGCCGCA GCATCACCAT CGAGACCGTC AATGGCGAAC CCGCCCGCCA ATCGCCGTTT
GCCGCCGCCC TGCGCGCCGG CGGCGCCATG GGAGAGGTCC GCGGCCTGCG CCTGGAATCA
CCGGCGGGGC GGCATTATTG A
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| Protein sequence | MPVSPFRPAT DTWFGEAFGQ ATTIQSRGWP AIRAGRHCLL IAPTGSGKTL AAFLSAIDRL
TGEPAPEPRT GYSVLYISPL KALATDIERN LRAPLTGITH TAARLGEPAR EPVVHIRTGD
TPQAERRAQA REPGDILVTT PESLYLLLGS KAAENLESVH TVIIDEVHAL AGNKRGAHLA
LSLERLAERC DQDPQRIGLS ATVHPVEVAR GFLGGDREVD VIDAAEPPRL DLEILAPEEP
PAEHAPATTE TPEPASPIPS GSILGAVYGQ GTGKLPAAGG DRAARLEPRL MAAILEHRST
IVFVNSRGLC ERLVQRINEA WREQQPEDAE PVEDLVAAHH GSVSHERRAE IEGRLKTGRL
RGIVATSSLE LGIDMGAVDL VIMVESPGAV ARGLQRAGRA GHGVGQVSRS LLLPRFRGDL
LECAVIGERM QAGALEPIHA PHNPLDVLAQ QLVAMVCERP RTVDELHALI RRAAPWRELS
RALLEATLDM LSGHYPSTDF ADLRPWLAWD RARDALTPRR GAALAARLNA GTIPDRGLYG
VHVGEGGPRI GELDEEMVFE LKTGENVTLG ASTWHVEAIT RDRVLVSPAP GEVGKLPFWH
GDGPGRPIQL GQAIGAATER LAHMDRAERT AWLREHAPLS EAAVETLCDY IDEQREATGQ
LPSDRRIVVE RFRDEVGDWR VCILTPFGAR VHAPWALALQ GALTSTSGFE VQVMYTDDGI
VLRLADSEDL PELDSLFPDP EELEEAVTRE LGHSTLFASA FRENAARALL LVRNRPGQRT
PLWAQRLKSQ QLLASVREYA SFPVVLETYR QVLADVFDLD ALREILRGVQ ERRIRVHEVE
TPQASPFARS LVFAYVAAYI YEQDAPMAER KAQALTLDRG MLAELLGQAE LRELIDPEAL
AELEAELAHA TEATRVPDAD ALHDLLRRRG DLTPDEVAAA CAEAPGPWLE QLARSLRAVE
VRIAGEPRWI AAEDAALYRD ALGVVPPPGL PAAFLEPPQH PLEQLLRRYA RTHGPFRSED
LGARYGLAPG ALLPALESLE RAGVLLRGEI RPQGTGEDWC ELDILRRLKR RTLARLRDEA
AAVDARALGR LLPAWQGLTE PGRGASALRD TLTQLEGIAL PWSAWIAHVL PMRVRDFSLD
ALDRITASGE FVWVGAGALG QRDGRIRFLR REQAMVLLEP EADAADTPAS DDPLAQAILE
TLDRRGACFY MELERAARSA QPDARQDAIE AAIWDRVWAG QITNDTFAPL RSLGQRKTSA
RGRRRPGQGL AGGRWSRVAD LIDPDVSLTE RAREQAENLL ARYGVVSREM ARAEGLPGGF
GRVYPVYRAM EDAGKLRRGH FVEGLTGAQF ARAGAVDRLR ALERAADDTP EPQWLASVDP
ANPWGQLLPW PQPPEAAEGR LRRVAGALVA LAGGQPLLYL AASGRQLFVW EAIPGIDTAE
EHAALVTEAI RQLAGSRWLP KRRSITIETV NGEPARQSPF AAALRAGGAM GEVRGLRLES
PAGRHY
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