Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2240 |
Symbol | |
ID | 8808020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2357582 |
End bp | 2362102 |
Gene Length | 4521 bp |
Protein Length | 1506 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | DEAD/H associated domain protein |
Protein accession | YP_003461466 |
Protein GI | 289209400 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.589998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTCT CGCCCTTTCG TCCCGCGACC GACACCTGGT TTGGCGAGGC CTTCGGGCAG GCGACCACCA TCCAGTCCCG GGGCTGGCCC GCGATCCGGG CCGGCCGCCA CTGCCTGCTG ATCGCGCCCA CCGGCAGCGG CAAGACGCTC GCCGCGTTCC TGAGTGCAAT CGACCGCCTG ACCGGCGAGC CGGCCCCGGA ACCCCGCACC GGCTACTCGG TGCTCTACAT CTCGCCGCTG AAGGCGCTGG CCACCGACAT CGAGCGCAAC CTGCGCGCCC CGCTGACCGG CATCACCCAC ACCGCCGCGC GCCTGGGTGA GCCGGCCCGC GAACCCGTGG TGCACATCCG CACCGGCGAC ACCCCGCAGG CCGAGCGCCG TGCCCAGGCG CGCGAACCCG GCGACATCCT GGTGACCACG CCGGAGTCGC TCTACCTGCT GCTGGGCTCG AAGGCCGCGG AGAACCTCGA GTCCGTCCAC ACGGTCATCA TCGACGAGGT GCACGCCCTG GCCGGGAACA AGCGCGGCGC GCACCTGGCC CTGTCGCTGG AGCGCCTGGC CGAACGCTGC GACCAGGACC CGCAGCGCAT CGGGCTGTCG GCCACCGTGC ACCCGGTGGA GGTCGCGCGC GGCTTCCTCG GGGGCGACCG CGAGGTGGAC GTGATCGACG CCGCGGAGCC CCCGCGCCTG GATCTGGAGA TCCTCGCCCC CGAGGAACCG CCCGCCGAGC ACGCACCCGC CACCACCGAG ACACCGGAAC CGGCAAGCCC CATCCCGTCC GGCTCCATTC TGGGCGCGGT CTACGGCCAG GGCACAGGGA AGCTCCCGGC GGCCGGTGGC GACCGCGCCG CACGCCTGGA GCCGCGGCTG ATGGCCGCGA TCCTGGAGCA CCGCTCCACC ATCGTGTTCG TCAACAGTCG CGGACTGTGC GAGCGCCTGG TCCAGCGCAT CAACGAGGCC TGGCGCGAAC AGCAGCCGGA GGATGCCGAA CCGGTGGAGG ACCTGGTCGC CGCCCACCAC GGCAGCGTGT CCCACGAGCG CCGCGCCGAG ATCGAGGGCC GACTGAAGAC CGGGCGCCTG CGCGGCATCG TCGCGACCAG CTCGCTGGAG CTGGGCATCG ACATGGGCGC GGTGGACCTG GTGATCATGG TCGAGTCCCC CGGCGCCGTC GCCCGCGGGC TGCAGCGCGC CGGCCGTGCC GGGCATGGCG TGGGTCAGGT CTCGCGCTCG CTGCTGCTGC CGCGCTTTCG CGGCGACCTG CTCGAATGCG CGGTGATCGG CGAGCGCATG CAGGCCGGCG CACTGGAGCC AATCCATGCC CCGCACAACC CGCTGGACGT GCTCGCCCAG CAGCTCGTCG CGATGGTCTG CGAACGCCCG CGCACGGTGG ACGAGCTGCA CGCGCTGATC CGCCGCGCCG CGCCCTGGCG CGAGCTGTCG CGCGCGCTGC TCGAGGCCAC GCTGGACATG CTCTCCGGCC ATTACCCCAG CACCGACTTC GCCGACCTGC GCCCCTGGCT CGCCTGGGAC CGCGCCCGCG ACGCGCTGAC CCCGCGCCGG GGGGCGGCGC TGGCCGCGCG CCTGAACGCC GGCACCATCC CCGACCGCGG CCTGTACGGC GTGCATGTCG GCGAGGGCGG CCCGCGCATC GGCGAGCTGG ACGAGGAGAT GGTGTTCGAG CTGAAGACCG GCGAGAACGT GACCCTCGGC GCCAGCACCT GGCATGTGGA GGCGATCACC CGCGACCGCG TGCTGGTCTC CCCCGCCCCC GGCGAGGTCG GCAAGCTGCC GTTCTGGCAT GGCGACGGCC CCGGCCGCCC GATCCAGCTC GGCCAGGCCA TCGGCGCCGC CACCGAGCGG CTGGCGCACA TGGACCGCGC CGAACGCACG GCCTGGCTCA GGGAACACGC GCCACTGTCG GAGGCGGCGG TCGAGACCCT CTGCGACTAC ATCGACGAGC AGCGCGAGGC CACCGGGCAG CTACCCTCGG ACCGGCGCAT CGTGGTCGAG CGCTTCCGCG ACGAGGTCGG CGACTGGCGC GTCTGCATCC TGACGCCGTT CGGCGCGCGC GTGCACGCCC CCTGGGCGCT GGCCCTGCAG GGCGCGCTGA CCAGCACCTC CGGCTTCGAG GTGCAGGTGA TGTACACCGA CGACGGCATC GTCCTGCGCC TGGCCGACAG CGAAGACCTG CCTGAACTCG ACAGCCTGTT CCCGGACCCG GAGGAGCTGG AGGAGGCCGT CACCCGCGAG CTGGGCCACT CCACCCTGTT CGCCAGCGCC TTCCGCGAGA ACGCGGCACG GGCCCTGCTG CTGGTGCGCA ACCGCCCGGG CCAGCGCACG CCGCTGTGGG CGCAGCGGCT GAAGTCGCAG CAGCTGCTGG CCTCGGTGCG CGAGTACGCG AGTTTTCCGG TGGTGCTGGA GACCTACCGC CAGGTGCTGG CCGACGTGTT CGACCTGGAC GCCCTGCGCG AGATCCTGCG CGGCGTGCAG GAACGGCGCA TCCGCGTGCA CGAGGTGGAG ACGCCGCAGG CCTCGCCGTT CGCGCGCAGC CTGGTGTTCG CCTATGTCGC GGCCTACATC TACGAGCAGG ACGCGCCGAT GGCCGAGCGC AAGGCCCAGG CGCTGACGCT GGACCGCGGC ATGCTGGCCG AACTGCTGGG CCAGGCCGAG CTGCGCGAGC TGATCGACCC CGAGGCCCTG GCCGAGCTGG AGGCCGAGCT GGCGCACGCC ACCGAGGCGA CCCGGGTGCC GGACGCCGAC GCCCTGCACG ACCTGCTGCG CCGGCGCGGG GACCTGACGC CAGACGAGGT CGCAGCCGCC TGCGCCGAGG CGCCGGGGCC GTGGCTGGAA CAGCTCGCGC GCTCCCTGCG CGCGGTGGAG GTGCGCATCG CCGGCGAGCC GCGCTGGATC GCGGCCGAGG ACGCGGCGCT GTACCGTGAT GCCCTCGGCG TGGTGCCCCC GCCCGGCCTG CCCGCCGCCT TCCTGGAACC GCCGCAGCAC CCGCTGGAAC AGCTGCTCCG CCGCTACGCC CGTACCCACG GTCCGTTCCG CAGCGAGGAC CTGGGCGCAC GCTATGGCCT CGCGCCGGGC GCACTGCTGC CGGCGCTCGA GAGCCTGGAG CGCGCCGGCG TGCTGCTGCG TGGCGAGATC CGCCCGCAGG GCACGGGCGA GGACTGGTGC GAACTGGACA TCCTGCGCCG GCTGAAGCGC CGCACCCTGG CCCGCCTGCG CGACGAGGCG GCGGCGGTGG ATGCCCGCGC ACTGGGCCGC CTTCTGCCCG CCTGGCAGGG CCTGACCGAG CCCGGCCGCG GCGCCAGCGC CCTGCGCGAC ACGTTGACCC AACTGGAGGG CATCGCCCTG CCCTGGTCCG CCTGGATCGC CCACGTGCTG CCGATGCGGG TGCGCGACTT CTCGCTGGAT GCGCTGGACC GCATCACCGC CTCCGGGGAG TTCGTCTGGG TGGGTGCCGG CGCGCTGGGC CAGCGCGACG GGCGCATCCG CTTCCTGCGC CGCGAACAGG CGATGGTGCT GCTGGAGCCG GAGGCCGATG CCGCGGATAC CCCGGCCAGC GACGACCCGC TGGCACAGGC GATCCTGGAG ACCCTGGACC GGCGCGGCGC CTGCTTCTAC ATGGAGCTGG AGCGCGCGGC CCGCAGCGCA CAGCCGGACG CCCGCCAGGA CGCGATCGAG GCCGCGATCT GGGATCGGGT CTGGGCCGGG CAGATCACCA ACGACACCTT CGCTCCGCTG CGCAGCCTGG GCCAGCGCAA GACCTCCGCC CGAGGTCGCC GACGCCCGGG CCAGGGCCTG GCCGGCGGGC GCTGGTCACG GGTCGCGGAT CTGATCGACC CCGACGTGTC GCTGACCGAG CGCGCCCGCG AACAGGCCGA GAACCTGCTG GCGCGCTACG GCGTGGTCAG CCGCGAGATG GCCCGCGCCG AGGGCCTGCC CGGCGGCTTC GGGCGCGTGT ATCCCGTCTA CCGCGCGATG GAGGACGCCG GCAAGCTGCG GCGCGGCCAC TTCGTCGAGG GCCTGACCGG CGCGCAGTTC GCCCGCGCCG GCGCGGTGGA TCGCCTGCGC GCGCTGGAAC GCGCGGCCGA CGACACCCCC GAACCGCAGT GGCTGGCCAG CGTCGACCCG GCCAACCCCT GGGGCCAGCT CCTGCCCTGG CCGCAGCCCC CGGAAGCGGC CGAGGGCCGC CTGCGCCGTG TCGCCGGGGC GCTGGTCGCG CTGGCCGGCG GCCAGCCGCT GCTCTATCTC GCCGCCTCGG GCCGCCAGCT GTTCGTCTGG GAGGCGATCC CCGGCATCGA CACCGCGGAG GAACACGCCG CGCTGGTAAC CGAGGCCATC CGCCAGCTCG CCGGGAGCCG CTGGCTGCCG AAGCGCCGCA GCATCACCAT CGAGACCGTC AATGGCGAAC CCGCCCGCCA ATCGCCGTTT GCCGCCGCCC TGCGCGCCGG CGGCGCCATG GGAGAGGTCC GCGGCCTGCG CCTGGAATCA CCGGCGGGGC GGCATTATTG A
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Protein sequence | MPVSPFRPAT DTWFGEAFGQ ATTIQSRGWP AIRAGRHCLL IAPTGSGKTL AAFLSAIDRL TGEPAPEPRT GYSVLYISPL KALATDIERN LRAPLTGITH TAARLGEPAR EPVVHIRTGD TPQAERRAQA REPGDILVTT PESLYLLLGS KAAENLESVH TVIIDEVHAL AGNKRGAHLA LSLERLAERC DQDPQRIGLS ATVHPVEVAR GFLGGDREVD VIDAAEPPRL DLEILAPEEP PAEHAPATTE TPEPASPIPS GSILGAVYGQ GTGKLPAAGG DRAARLEPRL MAAILEHRST IVFVNSRGLC ERLVQRINEA WREQQPEDAE PVEDLVAAHH GSVSHERRAE IEGRLKTGRL RGIVATSSLE LGIDMGAVDL VIMVESPGAV ARGLQRAGRA GHGVGQVSRS LLLPRFRGDL LECAVIGERM QAGALEPIHA PHNPLDVLAQ QLVAMVCERP RTVDELHALI RRAAPWRELS RALLEATLDM LSGHYPSTDF ADLRPWLAWD RARDALTPRR GAALAARLNA GTIPDRGLYG VHVGEGGPRI GELDEEMVFE LKTGENVTLG ASTWHVEAIT RDRVLVSPAP GEVGKLPFWH GDGPGRPIQL GQAIGAATER LAHMDRAERT AWLREHAPLS EAAVETLCDY IDEQREATGQ LPSDRRIVVE RFRDEVGDWR VCILTPFGAR VHAPWALALQ GALTSTSGFE VQVMYTDDGI VLRLADSEDL PELDSLFPDP EELEEAVTRE LGHSTLFASA FRENAARALL LVRNRPGQRT PLWAQRLKSQ QLLASVREYA SFPVVLETYR QVLADVFDLD ALREILRGVQ ERRIRVHEVE TPQASPFARS LVFAYVAAYI YEQDAPMAER KAQALTLDRG MLAELLGQAE LRELIDPEAL AELEAELAHA TEATRVPDAD ALHDLLRRRG DLTPDEVAAA CAEAPGPWLE QLARSLRAVE VRIAGEPRWI AAEDAALYRD ALGVVPPPGL PAAFLEPPQH PLEQLLRRYA RTHGPFRSED LGARYGLAPG ALLPALESLE RAGVLLRGEI RPQGTGEDWC ELDILRRLKR RTLARLRDEA AAVDARALGR LLPAWQGLTE PGRGASALRD TLTQLEGIAL PWSAWIAHVL PMRVRDFSLD ALDRITASGE FVWVGAGALG QRDGRIRFLR REQAMVLLEP EADAADTPAS DDPLAQAILE TLDRRGACFY MELERAARSA QPDARQDAIE AAIWDRVWAG QITNDTFAPL RSLGQRKTSA RGRRRPGQGL AGGRWSRVAD LIDPDVSLTE RAREQAENLL ARYGVVSREM ARAEGLPGGF GRVYPVYRAM EDAGKLRRGH FVEGLTGAQF ARAGAVDRLR ALERAADDTP EPQWLASVDP ANPWGQLLPW PQPPEAAEGR LRRVAGALVA LAGGQPLLYL AASGRQLFVW EAIPGIDTAE EHAALVTEAI RQLAGSRWLP KRRSITIETV NGEPARQSPF AAALRAGGAM GEVRGLRLES PAGRHY
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