| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2212 |
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| Symbol | |
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| ID | 8807992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2329959 |
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| End bp | 2331824 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | LppC family lipoprotein |
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| Protein accession | YP_003461438 |
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| Protein GI | 289209372 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.228557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTAT ACCTCTCTCC AGCTGCCGGG GGGCGCTACC GGGGCCGCCT GGCCCTGAGC
CTGCTCGCCG GCGCAATCCT CGCCGGCTGC GCGACGCCGC GCCCGGACCC CACCCCCGCC
CCGGAACCGG AGGAGGAACG ACCCGAGGTC GTTGACCTGC CGGCCGAGCA ACAGGCCCCG
ATCCTGATCA GCGAGGCCTG GGCGGGCCCG CAGCCGGACA ACGTGCGCGC AGCGATCGAC
GCGGTCCTGA GACTAGACGA GCCGGACGGC GACCTGGTCG ACCGCGCGGA CGCGCTGTGG
CGCGACCTGG ATGCCCAGCA CCGGGAACCG CTGGCCGACC GTGTGCGCGG TGCCCGCCTG
GCGGCCACAC GCGGCGAGTG GGAAACCGCG CGCGAGCGGC TCGGCGCCGA CGACCCGGAC
GACGAGACCC GCACGCCCGA GGTCTACCGC GAGGGTCTGG GCCTGCATGC CCGCCTGCTC
GAGCACGAGC GCGAATGGTA TCAGGCGCTG GACGCCCGGT TGCGCCTCGA CGGCCTGCTC
CTGCTGAAGC CCGATGAGCA AACAGCCAAC CAGAAACGCA TCTGGGGTCT GCTCTCGGCG
CTTCGACCCG CCCAGCGGGA CGGCCTGGCG GCGGGCGAAC ACCCGGATGC CGAGCCCTGG
GTTCGCCTGT TCACCGGATT GCGCAGCGTC CATTCGGAAG ACGACGCCCG CCGCGTGGCC
GGCCAGTGGC GGGAGCGCTA TCCGTCGCAC CCGGCCAACA GCCTGCTCCC GGAACTGGTC
GCAAGTCACC CGCTCCAGCC CGAGGCGCCG GAGACGATCC TGGTCCTCCT GCCGCTGTCC
GGTGATCTCG CCCAGCTCGG CAATGCGATC CTCGACGGCA TCACGCGCGC CTACTACGCG
GAGACCGGGG GCCACGGCCG ACTGTTGGTG CGCGACACAC GCGGCGACCC CGACACGGCT
GCAGACCTCT ACAGGCGCGG CGTCGAGGAC GGTGTGGACC GCATCATCGG ACCGCTCGAC
CGCGATGCGG TGCGCGCGGT GGCCGCAAGC GAGGAGACGC GCCCGACGCT GCTGCTCAAC
CGTACCCGGC TCGACGGCAA CGGTGCCTTC GGCACGCTGG CACTGAATCC GGAAGAGGAT
GCCTACGCTG TGGTGGACCG CGCGGTGCGC ACGGGTTGGC GCAACCCGCT CGTAATCCTG
CCCGAGGGTC AGTTCGGGGA CCGCATTGCG GAAGCCTACC AGGAAGCGCT CGCGGACCAC
GGCCTGCGGC CGCGGGACAT CGTGCGCCTG CGCCCGGATG CCGAGGACAT CAATGCCCGG
GTGGGCAATG CGCTCGGGAT TGAGCAGAGC GAGGCACGCA TTCGCGATGT CGCCCGCCGG
ACTGGCCTGA GTCTGGAGGG CGACCCCCAG GTTCGGGGCG ATGCCGATCA CCTGTTCGTG
ACCGGAACCT CGCGCCAGAT GCGGCAACTC GTGCCACACC TGCACTTCCA CGGGGCCCGG
CAACTCCCGA TTATGGCGAC GCCTCATATC TACGCCGGGC AGCCAAACGC CAATCGCGAC
CGCGATCTCA ACGGCATCGT TTTCCCCGAC GCGCCCTATC TGTTCACGAC CATCGAGCCG
CTGAACGGCG AAATGGCCGA AGGGGCGACT GACGAGCTCC CACGCTTCGT CGCGCTGGGC
ATGGATGCGA TGCGGCTGAG CCTGCATGAT CACGCGGTAC GCGAGGCCAC CCACCATCAA
ATCGTCGGGG GTGCCGGAAC CTGGTCACTG AACCCGATCA GCGGGGACTG GGTGCGCGAG
CCGGCCTGGG CGCGCTTCGA GAGCGGCGCA CCACGCCAGC TGGGGTCCAC CAGCGAGGGC
AGCTGA
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| Protein sequence | MNLYLSPAAG GRYRGRLALS LLAGAILAGC ATPRPDPTPA PEPEEERPEV VDLPAEQQAP
ILISEAWAGP QPDNVRAAID AVLRLDEPDG DLVDRADALW RDLDAQHREP LADRVRGARL
AATRGEWETA RERLGADDPD DETRTPEVYR EGLGLHARLL EHEREWYQAL DARLRLDGLL
LLKPDEQTAN QKRIWGLLSA LRPAQRDGLA AGEHPDAEPW VRLFTGLRSV HSEDDARRVA
GQWRERYPSH PANSLLPELV ASHPLQPEAP ETILVLLPLS GDLAQLGNAI LDGITRAYYA
ETGGHGRLLV RDTRGDPDTA ADLYRRGVED GVDRIIGPLD RDAVRAVAAS EETRPTLLLN
RTRLDGNGAF GTLALNPEED AYAVVDRAVR TGWRNPLVIL PEGQFGDRIA EAYQEALADH
GLRPRDIVRL RPDAEDINAR VGNALGIEQS EARIRDVARR TGLSLEGDPQ VRGDADHLFV
TGTSRQMRQL VPHLHFHGAR QLPIMATPHI YAGQPNANRD RDLNGIVFPD APYLFTTIEP
LNGEMAEGAT DELPRFVALG MDAMRLSLHD HAVREATHHQ IVGGAGTWSL NPISGDWVRE
PAWARFESGA PRQLGSTSEG S
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