Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2207 |
Symbol | |
ID | 8807986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2324995 |
End bp | 2326710 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Peptidoglycan glycosyltransferase |
Protein accession | YP_003461433 |
Protein GI | 289209367 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.345655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.115802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAGCGC TGAAGCGTCA GGTCAGCCAT GGCCGTCTGA AGGTGCTGCT GGTGGTCTCC GCGCTGGTGC TTGTGGCCCT GGTGCTGCGC GCAATCGATC TGCAGGTCCT CAGCCGCGAT TTCCTCACGC AGCAGGGCGA GCAGCGCCAG GTGCGTACGC TGACCGAATC GGCCCATCGC GGCATGGTCA CGGATCGCAA CGGCGAGCCG CTGGCGATCT CCGCCCCGGT GCAGACCGCC TGGGCGAACC CGAAGGACTT GCTGGAGCAA CGCGATCGCT GGCCGGAACT GGCCGAGGCG CTGCAGGTTG ATGCCGACTG GCTGGCCGAG CGCATCGAGT CGCGCGCCGG CCGGGAATTC ATGTACCTGC GCCGGCATAT GCTGCCGGCC CAGGCGGAGC AGGTGACCGC CTTGCGCATC CAGGGCCTTG GCCTGACGCG TGAGTTCCGG CGCTACTACC CGCATGGCGA GACGACCTCG CACATCCTTG GCTACACCGA TATTGACGAT CGCGGGCAGG AGGGCGTCGA GCTTGCGTTC AACGACTGGC TGTCGGGCGC GCCGGGTGCC AAGCGGGTGT TGCGCGACCG CCACGGACGC ACGATCCGCG ATGTGGCCAG TATCCGCCCC GCCCGCGACG GCCGCACGCT GCGCCTGACC ATCGATCAGC GCCTGCAGTA TCTGGCCTAC CGCGAGCTGA AGGCCGCGGT GGCGGAGCAT GATGCCCAGG GCGGGTCGGC CGTGCTGCTG GACGCCCGTA CGGGTGATGT CCTGGCGATG GTCAATCAGC CGAGTTTCAA CCCGAACAAT CGCGGTTCGA TCCGCTCGGA GCTCGCGCGC AACCGATCCC TGACCGACAG CATGGAGCCG GGTTCCGTCA TCAAGCCCTT CACCGTTGCG GCGGCCCTGG ATGCCGGCAT CATCGACCCC AATGTGACCC TGGACACCCG TCCCGGGACC ATGCGTGTCG GGCGGCTGAC CGTGCGCGAC TTTCGGGACT ATGGCGTGAT TGACCTGACC ACCCTGATCG CGCGCTCCAG CAATGTCGGC GCGACCAAGC TGGCGCTGGA CCTGCCGCCG GACCGATTCT GGCAGGTGCT GCACCAGGCC GGGTTCGGCC AGTCGACCGG GACCCACTTC CCGGGCGAGG TGAGCGGCCG TCTGCGCGAC TTCCCGACCT GGCGCGAGGT CGAACAGGCC ACGATGGGGT ATGGCTACGG CCTCTCCATT ACGCCACTGC AGATGGCCGC GGCCTATACC GCATTTGCCA ACGACGGTCA GCGCATCCCG GTACGGCTGG TGCAGACGGC CGATGACCTG CGCGAGCCGG CCGGCGTGAT GACCCCGGAG ACGGCCCAGC GCGTGCTCGC CATGATGGAG CACACGATCG GCTCCGAAGG TACGGCCCGC CAGGCCGCGA TCGACGGCTA CCGCATCGCG GGCAAGACCG GTACCAGCCG CAAGAGCGGG CCCGGTGGCT ATACCGAAGA TCGCTATATC TCCAGCTTTG TGGGTCTCGC GCCGGCGTCC GATCCGCGTT TCGTGATGGC CGTGGTGATC GACGAACCCA ATGCTGGCAC CTACTTCGGC GGCGCCGTGG CGGCGCCGGT ATTCCGCAAC GTGATCGGCT CGGCGCTGCG GATGTTCAAC GTGCGCCCGG ACGCGATGCC GGATATCCCC ATGCAGTTCG CCGCCGAACG CGAGGGCTCG ACATGA
|
Protein sequence | MGALKRQVSH GRLKVLLVVS ALVLVALVLR AIDLQVLSRD FLTQQGEQRQ VRTLTESAHR GMVTDRNGEP LAISAPVQTA WANPKDLLEQ RDRWPELAEA LQVDADWLAE RIESRAGREF MYLRRHMLPA QAEQVTALRI QGLGLTREFR RYYPHGETTS HILGYTDIDD RGQEGVELAF NDWLSGAPGA KRVLRDRHGR TIRDVASIRP ARDGRTLRLT IDQRLQYLAY RELKAAVAEH DAQGGSAVLL DARTGDVLAM VNQPSFNPNN RGSIRSELAR NRSLTDSMEP GSVIKPFTVA AALDAGIIDP NVTLDTRPGT MRVGRLTVRD FRDYGVIDLT TLIARSSNVG ATKLALDLPP DRFWQVLHQA GFGQSTGTHF PGEVSGRLRD FPTWREVEQA TMGYGYGLSI TPLQMAAAYT AFANDGQRIP VRLVQTADDL REPAGVMTPE TAQRVLAMME HTIGSEGTAR QAAIDGYRIA GKTGTSRKSG PGGYTEDRYI SSFVGLAPAS DPRFVMAVVI DEPNAGTYFG GAVAAPVFRN VIGSALRMFN VRPDAMPDIP MQFAAEREGS T
|
| |