| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2185 |
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| Symbol | |
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| ID | 8807964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2299297 |
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| End bp | 2300508 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003461411 |
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| Protein GI | 289209345 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.170941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATT CCGGGACAAT CTACGCTTGG GAAGGACTGA ACAAGAACGG CGACCGGGTC
AAGGGCGAAA CCCCGGCCGA CAGCGAAGCC GTCGCACGCT CCGAACTGCG CAAGAACGGC
ATCAATGTCG TCAAGATTCG CAAGAAGCCA AAGTCGCTAC TCTCCGGGGG CAAGAAAAAG
ATCGTCCCCG CGGACATCGC CTACTTCCTG CGACAGATGA CCACGATGCT GCAATCCGGC
GTGCCGCTGG TACAGGCCTT CGAGATTGTC GGGCGCGGCA ACGAGAAGCC GGCGATGCGC
GATCTCGTGC TCAAGCTCAA GGCCGACGTC GAGGGCGGCG AGACCTTCGC CGCCGCGCTC
GCCAAACAGC CCAAGTACTT CGACGACCTG GTGGTCAACC TGGTCGAGGC CGGCGAGCAG
GCGGGGACGC TCGAGACCCT GCTCGACAAG GTCGCCACCT ACAAGGAAAA GACCGAGGCC
CTGAAGGCCA AGATCCGCAA GGCGATGTTC TACCCGGCGG CGGTCGTCGT GGTGGCCATC
GTGGTGACGG CCATCCTGCT GATCTACGTG GTCCCGCAGT TCGAATCCCT GTTCCAGGGC
TTTGGCGCGG ACCTGCCGGT CTTCACCCGC ATGGTGGTCG ACCTGTCGGG ATTCGTGCAG
TCCTGGTGGT GGCTGATCCT CGCGATCATG GTCGCGATCG GCTTCGCATT CGTAGAGACC
CGGCGGCGTT CGCCACGATT TGCACGTTTC CTCGATATCG CGATCCTCAA GGCCCCGGCC
TTTGGCCCGA TCCTGCGCAA AGCCGCGATC GCCCGCTTCG CACGGACGCT GTCCACCATG
TTCTCCGCCG GCGTCCCGCT GGTCGATGCC CTGACTTCGG TCTCCGGCGC CACGGGCAAC
GCGCTGTATC GCGAGGCCAC GCTGCGCATG CGCGACGAGA CCTCGGCCGG GGCCCAGCTG
CAATGGTCGA TGCGCAATAC CGGCGTGTTC CCCAACATGG TCGTGCAGAT GGTCGCGATC
GGCGAGGAAT CCGGCTCGCT GGACTCGATG CTGGCGAAGG TGGCGGACTT CTACGAGGCC
GAGGTGGACA ACGCCGTGGA CAGCCTCTCG AGCCTGCTGG AACCCCTGAT CATGGTCGTA
CTCGGCGTAC TGGTCGGCGG CCTGGTGATC GCGATGTACC TGCCCATCTT CCAGATGGGT
CAGGTCATCT AG
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| Protein sequence | MADSGTIYAW EGLNKNGDRV KGETPADSEA VARSELRKNG INVVKIRKKP KSLLSGGKKK
IVPADIAYFL RQMTTMLQSG VPLVQAFEIV GRGNEKPAMR DLVLKLKADV EGGETFAAAL
AKQPKYFDDL VVNLVEAGEQ AGTLETLLDK VATYKEKTEA LKAKIRKAMF YPAAVVVVAI
VVTAILLIYV VPQFESLFQG FGADLPVFTR MVVDLSGFVQ SWWWLILAIM VAIGFAFVET
RRRSPRFARF LDIAILKAPA FGPILRKAAI ARFARTLSTM FSAGVPLVDA LTSVSGATGN
ALYREATLRM RDETSAGAQL QWSMRNTGVF PNMVVQMVAI GEESGSLDSM LAKVADFYEA
EVDNAVDSLS SLLEPLIMVV LGVLVGGLVI AMYLPIFQMG QVI
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