| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2179 |
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| Symbol | |
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| ID | 8807954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2293408 |
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| End bp | 2294103 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | ribosomal protein L1 |
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| Protein accession | YP_003461405 |
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| Protein GI | 289209339 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.965533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAA TGACCAAGCG AATGAAGGCC ATCCGCGAAA AGGTCGAGCC GGGCCGTCTG
TATCCGGTGA CCGAGGCCTT TGACCTGCTG CGTGAGCTGC CCAAGGCGAA GTTCCGCGAG
TCGGTCGACG TGGCCGTGAA TCTCGGCGTG GACCCGCGCA AGTCCGATCA GGTCGTGCGG
GGCTCCACGG TGCTGCCGCA CGGCAATGGC AAAAGCGTGC GCGTGGCCGT GTTCACCCAG
GGCGCCAATG CCGACGCCGC GAAGGAAGCC GGTGCCGATG TGGTGGGCAT GGACGACCTC
GCCGAACAGG TGAAGGCCGG CCAGATGGAT TTCGACGTGG TGATCGCCTC CCCGGACGCG
ATGCGAGTCG TCGGTCAGCT CGGGCAGATC CTGGGCCCGC GTGGCCTGAT GCCGAACCCG
AAGGTCGGCA CCGTGACGCC GGACGTCGCG ACCGCGGTGA CCAACGCCAA GAGCGGCCAG
GTCCGCTACC GCACCGACAA GGGCGGGATC GTGCACTGCA CCATTGGCGC GGCGGACTTC
GATTCCAGCT CGCTGGCCGA GAACCTGAAC GCCCTGCTGG CGGATCTGGT CAAGATGAAG
CCGGCGACGT CCAAGGGGCA GTACGTCAAG GGGGTCACGA TCTCCACGAC GATGGGCCCG
GGGGTGAAGG TCGACCAGGC GTCATTGTCA CTGTAA
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| Protein sequence | MAKMTKRMKA IREKVEPGRL YPVTEAFDLL RELPKAKFRE SVDVAVNLGV DPRKSDQVVR
GSTVLPHGNG KSVRVAVFTQ GANADAAKEA GADVVGMDDL AEQVKAGQMD FDVVIASPDA
MRVVGQLGQI LGPRGLMPNP KVGTVTPDVA TAVTNAKSGQ VRYRTDKGGI VHCTIGAADF
DSSSLAENLN ALLADLVKMK PATSKGQYVK GVTISTTMGP GVKVDQASLS L
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