Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2171 |
Symbol | |
ID | 8807946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2279383 |
End bp | 2280573 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | translation elongation factor Tu |
Protein accession | YP_003461397 |
Protein GI | 289209331 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00686859 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.373473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCAAGG AAAAGTTCGA GCGTAAGAAG CCGCATGTGA ATGTGGGGAC GATTGGTCAT GTGGACCATG GCAAGACCAC GCTGACGGCG GCGATGACGA CGGTGCTGGG CAAGAAGTAC GGTAGCGAAG CCCGTGCGTT TGACCAGATC GACAATGCGC CGGAAGAGAA GGCGCGCGGG ATTACGATTG CCACGGCGCA CGTGGAATAC GAATCCGACA TTCGTCACTA CGCGCATGTG GATTGCCCTG GGCACGCGGA CTACGTGAAG AACATGATCA CGGGTGCGGC GCAGATGGAC GGCGCGATTC TGGTGGTGTC CGCGGCCGAT GGTCCGATGC CGCAGACCCG CGAGCACATT CTGCTGGCGC GTCAGGTGGG TGTGCCGTAC ATCGTGGTGT TCCTGAACAA GGCCGACATG GTCGACGACC CCGAGCTGCT CGAGCTGGTC GAGATGGAAG TGCGCGATCT GCTGTCTTCC TATGATTTCC CGGGCGACGA CACCCCGGTG ATCACCGGTT CCGCGCTGAA GGCGCTGGAA GGTGACGAGA GCGAAGTGGG CGCGCAGGCG ATCTACAAGC TGGTCGAGGC GATGGACAGC TGGATTCCGG AGCCGGAGCG CGCGGTGGAC GGCGACTTCC TGATGCCGGT GGAAGACGTG TTCTCGATCT CCGGGCGCGG CACTGTGGTG ACGGGTCGTA TCGAGCGCGG TGTGGTCAAG GTGGGCGAGG AGATCGAGAT TGTCGGTATC CGCGACACCC AGAAGACCAC CGTCACGGGT GTCGAGATGT TCCGCAAGCT GCTGGACCAG GGCGAAGCGG GCGACAACGT GGGCATTCTG CTGCGTGGTA CCAAGCGCGA CGAAGTGCAG CGTGGTCAGG TGCTGTGCAA GCCGGGTTCG ATTACGCCGC ACACGCATTT CGAGGCTGAG GTGTACATTC TGGGCAAGGA CGAGGGTGGT CGTCATACCC CGTTTTTCAA TGGTTATCGC CCGCAGTTCT ACTTCCGCAC GACCGATGTG ACGGGTTCGG TGGAGCTGCC GGAAGGCACC GAGATGGTGA TGCCGGGTGA CAACGTGAAG ATGACCGTGT CGCTGATCAG CCCGATCGCG ATGGAAGATG GTCTGCGCTT TGCGATTCGC GAAGGCGGCC GTACCGTCGG CGCCGGCGTC GTATCCAAGA TTATTGAGTG A
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Protein sequence | MSKEKFERKK PHVNVGTIGH VDHGKTTLTA AMTTVLGKKY GSEARAFDQI DNAPEEKARG ITIATAHVEY ESDIRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI LLARQVGVPY IVVFLNKADM VDDPELLELV EMEVRDLLSS YDFPGDDTPV ITGSALKALE GDESEVGAQA IYKLVEAMDS WIPEPERAVD GDFLMPVEDV FSISGRGTVV TGRIERGVVK VGEEIEIVGI RDTQKTTVTG VEMFRKLLDQ GEAGDNVGIL LRGTKRDEVQ RGQVLCKPGS ITPHTHFEAE VYILGKDEGG RHTPFFNGYR PQFYFRTTDV TGSVELPEGT EMVMPGDNVK MTVSLISPIA MEDGLRFAIR EGGRTVGAGV VSKIIE
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