Gene TK90_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2163 
Symbol 
ID8807938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2275266 
End bp2275946 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content64% 
IMG OID 
Productribosomal protein S3 
Protein accessionYP_003461389 
Protein GI289209323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0196191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.200155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCAGA AAGTACATCC GACCGGCATC CGCCTGGGCA TCTCTCGCCC GTGGTCGGCC 
ACCTGGTACG CCGACGGTCG CGAATTTGGC GAAACGTTGA ACAACGACAT CAAGCTGCGC
GAGTTTCTGC AGAAGAAACT GGCCCACGCG TCGGTAAGCC GCATCAGTAT CTCGCGCCCG
GCCAAGGCCG CGCACATTAC GATCCAGACC GCGCGTCCCG GGATCGTGAT TGGCAAGAAG
GGCGAGGACA TCGAGAAGCT CCGCCAGGAC GTGGCACGCG AGACCGGGCT GGAGAAAGGA
ACGGTCAAGA TCAACATCGA AGAAGTGCGC AAGCCCGAGA TCGAGGCCCA GTTGGTCGCC
GAAGGGATCG CCCAGCAGCT GGAACGCCGC ATCATGTTCC GGCGTGCGAT GAAGCGCGCC
GTCGGGAACG CGATGCGCCT TGGGGCCCAG GGCATCAAGG TGCACGTGTC TGGCCGCCTG
AACGGCGCCG AGATTGCGCG CTCCGAATGG TACCGCGAAG GCCGCGTGCC GCTGCATACC
CTGCGTGCCG ATATCGACTA CGGGTTTGCG GAAGCGCGGA CCACCTACGG GATCATTGGC
GTGAAGGTGT GGATCTTCAA GGGCGAGGTC TTTGGCCTGG AGCCGACCGA AGGGACCCGT
GCCGCCGCCA ACGCGAGCTA G
 
Protein sequence
MGQKVHPTGI RLGISRPWSA TWYADGREFG ETLNNDIKLR EFLQKKLAHA SVSRISISRP 
AKAAHITIQT ARPGIVIGKK GEDIEKLRQD VARETGLEKG TVKINIEEVR KPEIEAQLVA
EGIAQQLERR IMFRRAMKRA VGNAMRLGAQ GIKVHVSGRL NGAEIARSEW YREGRVPLHT
LRADIDYGFA EARTTYGIIG VKVWIFKGEV FGLEPTEGTR AAANAS