Gene TK90_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2162 
Symbol 
ID8807937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2274840 
End bp2275253 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content64% 
IMG OID 
Productribosomal protein L16 
Protein accessionYP_003461388 
Protein GI289209322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00554254 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.180391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGC CAAAAAGAAC CAAGTTCCGC AAGCAGTTCA AGGGCCGTAA CCGAGGCATG 
GCCTCGACCG GCGCCAAGGT CAGCTTCGGC GAATACGGCC TGCAGGCCGT CGAGCGGGGC
CGCATTACGG CCCGCCAGAT CGAGGCCGCG CGTCGCGCGA TGGTCCGCCA CATCAAGCGT
GGCGGGAAGA TCTGGATCCG GGTGTTCCCG GATGTGCCGG TGACCAAGAA GCCGCTTGAA
GTCCGTATGG GTAAGGGTAA GGGCGGCGTC GAGTACTGGG TCTGCAAGGT GCAGCCTGGT
CGCATGCTCT ACGAAATGGA AGGTGTGCAC GAGGACGTGG CGCGTGAGGC GATGCGTCTG
GCGGCCGCCA AGTTGCCGGT GAAGACGGTG TTTACCCGTC GGCAGGTGAT GTGA
 
Protein sequence
MLQPKRTKFR KQFKGRNRGM ASTGAKVSFG EYGLQAVERG RITARQIEAA RRAMVRHIKR 
GGKIWIRVFP DVPVTKKPLE VRMGKGKGGV EYWVCKVQPG RMLYEMEGVH EDVAREAMRL
AAAKLPVKTV FTRRQVM