Gene TK90_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2125 
Symbol 
ID8807900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2245570 
End bp2246166 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content72% 
IMG OID 
Productmaf protein 
Protein accessionYP_003461351 
Protein GI289209285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0385886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCCG TGGCTCATCC GCTGTTACTG GCCTCCGCCT CCCCGCGCCG CCGCGAGCTG 
CTGGAGCAGA TCCAGCTCGT CTTCGAAGTA GCCCCGATGG ATGTGGACGA GACCCCGCGG
CCGGGCGAGT CACCAGAGGT GCTGGTCGAG CGCCTCGCCA TCGCCAAGGC CGAGGCGGCC
CTCGAACGCA GCGCCCCGGG GCAGTGGGTG CTGGCCGCGG ATACCGTAGT CGCGGTGGGC
GGCGAGGCCC TGGGAAAGCC CGCGGCTTTT GCCGACGCCG CGGCCATGCT GCAGCGCCTT
TCCGGCGGGG AGCACCGGGT GGTGTCCGGC ATGGCGCTGG GCCGCCCCGG TGAATCCATG
CGGGCGCGCA CTGTGACGAC CCGTGTGCGC ATGCGGCCGC TGACGCCATC CGACATCGAG
CACTACTGGG CGACGGGCGA GCCCCGCGGC AAGGCCGGGG CCTATGCGAT CCAGGGGCGC
GGTGCCGCCT TTGTCGAGTG GATCGCGGGT TCCTATACCA ACGTGGTCGG CCTCCCGCTG
TTCGAGCTCG AACAGTGGCT GGCGAGAATC CCCGACCCGC CGCCGCGCCG CGCCTGA
 
Protein sequence
MTPVAHPLLL ASASPRRREL LEQIQLVFEV APMDVDETPR PGESPEVLVE RLAIAKAEAA 
LERSAPGQWV LAADTVVAVG GEALGKPAAF ADAAAMLQRL SGGEHRVVSG MALGRPGESM
RARTVTTRVR MRPLTPSDIE HYWATGEPRG KAGAYAIQGR GAAFVEWIAG SYTNVVGLPL
FELEQWLARI PDPPPRRA