Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2110 |
Symbol | |
ID | 8807885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2228447 |
End bp | 2228812 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | type IV pilus assembly PilZ |
Protein accession | YP_003461336 |
Protein GI | 289209270 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.623877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCGAC GGTTTCAACG TATCCCTCTG GAGTTTCCGG CCACCCTGAT CCATGCGAAC GGGGAGTGTC CCGTGCGTGT CGAGGATATC TCGCTGCGCG GTGTGCTGGT CGAGGGATCC CGGATTCCGG CGGTCGAGCT GGACGCCTTG GTGACGCTGG ATATCCCGTT GTCCGAGGAG GCGCGCATCA CCTTCGAGGG GCGCGTGCGC TGGCAGGAGG GTCTGTGGCT GGGGCTCGAG ATCGAGGCGA TGCCGCTGGA ATCGGCGACG CACCTGCGCC GCCTGGTCGA GCTCAATCTG GGCGATGAGG CCTTGCTGGA GCGGGAGTTT GCCGCGATGG CCGAGTCCGC CCCGCCTCGC GAATAA
|
Protein sequence | MQRRFQRIPL EFPATLIHAN GECPVRVEDI SLRGVLVEGS RIPAVELDAL VTLDIPLSEE ARITFEGRVR WQEGLWLGLE IEAMPLESAT HLRRLVELNL GDEALLEREF AAMAESAPPR E
|
| |