Gene TK90_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2110 
Symbol 
ID8807885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2228447 
End bp2228812 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content66% 
IMG OID 
Producttype IV pilus assembly PilZ 
Protein accessionYP_003461336 
Protein GI289209270 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.623877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGAC GGTTTCAACG TATCCCTCTG GAGTTTCCGG CCACCCTGAT CCATGCGAAC 
GGGGAGTGTC CCGTGCGTGT CGAGGATATC TCGCTGCGCG GTGTGCTGGT CGAGGGATCC
CGGATTCCGG CGGTCGAGCT GGACGCCTTG GTGACGCTGG ATATCCCGTT GTCCGAGGAG
GCGCGCATCA CCTTCGAGGG GCGCGTGCGC TGGCAGGAGG GTCTGTGGCT GGGGCTCGAG
ATCGAGGCGA TGCCGCTGGA ATCGGCGACG CACCTGCGCC GCCTGGTCGA GCTCAATCTG
GGCGATGAGG CCTTGCTGGA GCGGGAGTTT GCCGCGATGG CCGAGTCCGC CCCGCCTCGC
GAATAA
 
Protein sequence
MQRRFQRIPL EFPATLIHAN GECPVRVEDI SLRGVLVEGS RIPAVELDAL VTLDIPLSEE 
ARITFEGRVR WQEGLWLGLE IEAMPLESAT HLRRLVELNL GDEALLEREF AAMAESAPPR
E