| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2101 |
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| Symbol | |
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| ID | 8807876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2218673 |
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| End bp | 2220559 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | DNA topoisomerase IV, B subunit |
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| Protein accession | YP_003461327 |
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| Protein GI | 289209261 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.846279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTATT CCGCATCCGA TATCGAGGTC CTCGAGGGGC TGGACCCGGT GCGCAAGCGC
CCGGGCATGT ATACCGACAC GACCCGCCCG AACCACCTCG CGCAGGAGGT GATCGACAAC
TCGGTGGACG AGGCGATCAG CGGCCACGCC AAGCGCATCG ACGTGATCCT GCACAAGGAC
GACTCGGTCT CGGTGTCGGA TGACGGTCGC GGCATGCCGG TGGACCTGCA CCCGCGCGAG
AATCGCCCCG GGGTCGAGGT GATCCTGTCC ACGCTGCATG CGGGCGGGAA GTTCTCGGAC
AAGAACTACC AGTTCTCCGG TGGCCTGCAC GGGGTCGGCG TGTCGGTGGT CAATGCGCTG
TCGAAGCAGC TCGAGGTGCA GATCAAGCGC GATGGCCGCG AGTACCGCAT GGCGTTCGCC
GGCGGGTACA AGACCCAGGA TCTGGAGGCG GTCGGCGACG TCGGCAAGCG CAACACCGGC
ACCACGCTGC ACTTTTGGCC GGACCCGCAG TATTTCGATT CCGCGAAGTT CTCGGTGCCC
CGGCTCAAGC ACATCCTGCG CGCGAAGGCC GTGTTGTGCC CGGGCCTGAC CGTCACGTTC
CATGACGAGA CCACCGGCGA GGCCTGCGAG TGGTGCTATC AGGCGGGGCT GCGCGACTAC
CTGGTGGAGG CCCTGGACGG CCTGGAGCGG GTGCCGGAGG AGCCGTTCAT GGGGTCGGTC
TCCGGGGCCA CCGAGGCCGC CGACTGGGCG GTGACCTGGC TGCCGGAGGG CGGCGAGGTC
GTCAGCGAGA GCTACGTGAA CCTGATCCCG ACCACCCAGG GCGGGACGCA TGTGAACGGC
CTGCGCACCG GCCTGACCGA GGCCGTGCGC GAGTTCTGCG AGTTTCGCAG CCTGCTCCCC
CGCGGGATCA AGCTGGCCCC GGAAGACGTC TGGGAACGGG TCGCCAGTGT GCTGTCGTTC
AAGATGCAGG ACCCGCAGTT CGCCGGGCAG ACCAAGGAAC GCCTGTCCTC GCGTCAGGCC
GCGCCGTTTG TCTCCGGCGT GGTCAAGGAC GCCTTCAGTC TGTGGCTGAA CCAGCACCCG
CAGCAGGGCG AGCGCATCGC CGAACTGGCG ATCCAGAACG CGCAAAAGCG CAGCCGCGCC
GGGCGCAAGG TGGTGCGCAA GAAGGTCACC CAGGGCCCGA CCCTGCCGGG CAAGCTGGCC
GACTGCGCCA GCCAGGACCT GGAGCGCACC GAGCTGTTCC TGGTCGAGGG CGACTCCGCC
GGCGGCTCCG CCAAGCAGGC GCGCGATCGC GACTTCCAGG CGATCATGCC GCTGCGTGGC
AAGATCCTGA ATTCCTGGGA GGTGGACCCT GACCAGGTGC TGGGCTCGCA GGAGATCCAC
GACATCTCCG TGGCCCTGGG TGTGGACCCG GGCCAGGCCA GCCTGGACGG GCTGCGCTAC
GGCAAGGTCT GCATCCTGGC CGATGCCGAC TCCGACGGCG CGCACATCGC AACGCTGCTG
TGTGCGCTGT TCCTGAAGCA CTTCCGCCCG CTGGTGGAGC GGGGGCACGT GTACATCGCC
ATGCCGCCGC TTTACCGCGT GGACGTCGGC AAGCAGACCT TCTATGCCCT GGACGACGAC
GAGAAGGCCG GCGTGCTGGA ACGCATCGAG GCGGAAAAGA TGAAGGGCAA GGTCTCCGTG
ACCCGCTTCA AGGGGCTGGG CGAGATGAAC CCGCTACAGC TGCGCGAGAC CACCATGAAC
CCGGACACCC GGCGCCTGGT GCAGCTCACC CTCGACGCCG CCGACGACAC CATGCAGCTG
CTGGACATGC TGCTCGGCAA GAAACGCGCC TCCGAACGCC GCGCCTGGCT GGAAGGCAAG
GGCCACCTGG CCGACGTCGC CGTCTGA
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| Protein sequence | MSYSASDIEV LEGLDPVRKR PGMYTDTTRP NHLAQEVIDN SVDEAISGHA KRIDVILHKD
DSVSVSDDGR GMPVDLHPRE NRPGVEVILS TLHAGGKFSD KNYQFSGGLH GVGVSVVNAL
SKQLEVQIKR DGREYRMAFA GGYKTQDLEA VGDVGKRNTG TTLHFWPDPQ YFDSAKFSVP
RLKHILRAKA VLCPGLTVTF HDETTGEACE WCYQAGLRDY LVEALDGLER VPEEPFMGSV
SGATEAADWA VTWLPEGGEV VSESYVNLIP TTQGGTHVNG LRTGLTEAVR EFCEFRSLLP
RGIKLAPEDV WERVASVLSF KMQDPQFAGQ TKERLSSRQA APFVSGVVKD AFSLWLNQHP
QQGERIAELA IQNAQKRSRA GRKVVRKKVT QGPTLPGKLA DCASQDLERT ELFLVEGDSA
GGSAKQARDR DFQAIMPLRG KILNSWEVDP DQVLGSQEIH DISVALGVDP GQASLDGLRY
GKVCILADAD SDGAHIATLL CALFLKHFRP LVERGHVYIA MPPLYRVDVG KQTFYALDDD
EKAGVLERIE AEKMKGKVSV TRFKGLGEMN PLQLRETTMN PDTRRLVQLT LDAADDTMQL
LDMLLGKKRA SERRAWLEGK GHLADVAV
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