| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2097 |
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| Symbol | |
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| ID | 8807872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2213333 |
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| End bp | 2214994 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003461323 |
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| Protein GI | 289209257 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACC GAATCGCCCA CCGCATCGCC CACCGCGTCG CCCATCGGAT CACGCGCATC
ATCACCCTGC TGGCCCTCGC CCTCGCGACG GCCCTCGCTA CCGGTCCCGC CCTGGCCGAC
GACCTCGAGA TCACGCACTG GGGCGCCGAG CTGGAATGGT TCCTGGAGGC CGGCGCCCCG
GCGCCGGGGG CAACGGAGAC CTTCGTGGTC CATGCCACCT GGCTGGACGA CTTCCGGCCG
GTCACCACGG GGGAGGTAAC CCTGCAGATG CATAACCGCT ACGGGGAGAT ATTCAGCGAG
GCCACGGCCG GCCTCGACCG GGAAGGCATC TTCGCGGTCC CCCTGACCCT GCCCGCGCCG
GGACGCTATT ACCTGACGGC CGTCCACGAA GACGCCGACG GCATGCGCGA GAGCACGCTC
GGTCAGGTAC ACGTCCCCGG GGATCACGAC CAAGGGGACG AAGATCACGG TCACGACCAT
GACCATGACC ATGCGGGCGA CGACCGCAGG CATGCCCATG GCGAGGACGA CCACGGAGAC
GATCACGGCC ACGATGACCA TGGACACGAT CACGGCCATG GCGACGAAGG GCACGCGCAC
GACGCGGACG ACACGATCAC CTTTCTCAAG GAGACCCAGT GGCGCATGCG CTTCGCCACC
GCCCCGGCCC GTTATGAGCC GTTCGCCGAA CGCATCGAAG TCCCGGGGAC CATCCGCGAG
GTACCCGGCA AGCGCACGCG GCTGATCGCG CCCGCCGATG GCGTCATCAC GGCCGACGGG
GAATGGCCGG CACCCGGGCG CGAGGTCAAC GCCGGGGACA GTCTGATGCG TCTGGCGGTC
TTGCCGGACA GCGGCACCTC CAGCGGCCTG GCCCTGGATC TCGCCCGCGC ACAGGAACGT
CTGACCGCGG CCGAGGCGGA TCTGGAGCGT CTGACGGCGC TCGCCGAGGA GGGCGTGATC
GCCGACAGTC GGGTGGTGGA GGCCCGCCGC GAACGCAACA CCGCGCGGGC CGAACTGGAC
GACGCCCGCG ACCGCCAGGA ACGGCTCGAC GGTAGCGCCG TCTCCGGCAC CCTGGCCCTG
CGCGCCCCGG CGGGTGGCCG GGTGGAGTCC CTGGATGTCA GCCCCGGAGA GGTCGTCCAG
GCCGGCCAGC AACTGGCCCG CGTGCTCGAT GGCGAGACGC TGTGGCTGGT GGCGCACCTC
TACCCGGCGG ACCTGGAGCG GGTCACCTCC CTGGCCGATC CGGCCATGCG CCACCCGGGC
AGTCGCGAGT GGCATGCCAT CGGCGGCGAA CCGGTCTGGG AAGGCGGTGC ATTCGACGGG
CCCGGGCAGA CGCTGCCGGT CGCCTTTGCG CTGGAGGACA CGGACACCCG GTACCGGCCC
GGCATGCCGC TGACCGTCTC GCTGGCGGCA GGGCCATCGC GGCACCGCGT CACGCTCCCG
GCCGCGGCAC TGATCGACGA CGACGGCGTG CAGGTGGTGA TGGTCCAGAC CGGGGGCGAG
ACGTTCGAGC GGCGACCGGT GCGTACCGGG ATTCGTTCCG CCGGCCGGGT GGAGATCCTC
GCCGGGGTCG AGGCGGACGA ACGGGTGGTG GTCCAGGGCG CCTATGCAGT CCTGCTCGCG
GGCCGCGATA CCGATGACAT CGGCCACGGC CACAGCCACT AG
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| Protein sequence | MTHRIAHRIA HRVAHRITRI ITLLALALAT ALATGPALAD DLEITHWGAE LEWFLEAGAP
APGATETFVV HATWLDDFRP VTTGEVTLQM HNRYGEIFSE ATAGLDREGI FAVPLTLPAP
GRYYLTAVHE DADGMRESTL GQVHVPGDHD QGDEDHGHDH DHDHAGDDRR HAHGEDDHGD
DHGHDDHGHD HGHGDEGHAH DADDTITFLK ETQWRMRFAT APARYEPFAE RIEVPGTIRE
VPGKRTRLIA PADGVITADG EWPAPGREVN AGDSLMRLAV LPDSGTSSGL ALDLARAQER
LTAAEADLER LTALAEEGVI ADSRVVEARR ERNTARAELD DARDRQERLD GSAVSGTLAL
RAPAGGRVES LDVSPGEVVQ AGQQLARVLD GETLWLVAHL YPADLERVTS LADPAMRHPG
SREWHAIGGE PVWEGGAFDG PGQTLPVAFA LEDTDTRYRP GMPLTVSLAA GPSRHRVTLP
AAALIDDDGV QVVMVQTGGE TFERRPVRTG IRSAGRVEIL AGVEADERVV VQGAYAVLLA
GRDTDDIGHG HSH
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