| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2081 |
|---|
| Symbol | |
|---|
| ID | 8807856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2200656 |
|---|
| End bp | 2201321 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003461308 |
|---|
| Protein GI | 289209242 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.442221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC TACCGAGTTT TACCGTGCCA GCCGTCGCGG GTCTGGCTTT TGTGTTGATC
ACGTTTTCCG GCTGCGGCCA GTCGAACGAC TCGGCCCAGG CCGCGGAACA GCACGCCCCG
ATCCAGGAAG AACCGGACGC GCCGGCGATG GAGCGCGCGA TCGGCTTCAT GGAGTCCTGG
ATCGAATTGT TCGACGCCAT GAGTGCGGAA CTGGCCGGGG TCGACAGCCA GGAGGCCGCC
AATGAGCACG CCACCTGGCT GACCGAGGAA CTGACGCCAC GCCTGGAACA GCTGGCGGGC
GAGATGATCA TCTTCATGGA GTCGATCGAG GAACACGAGA TGGAGCTCAT GGAGGCGTCG
TTTGATGCCC CGGAAAACCA CCAGCGCATG CTGGAACTGG AAGGACGCAT GGAGCAGTCG
CTGGATCGAC TGGAAGAGAA CATCATGCGT GTCGAGAGCA CGTACGCAAC GCCGGCACTG
GAGGTGGCAT GGATGAACTT CGCCCGGACC AACGAGCGGC TGGAACGGCA GATGGAGGCC
ACGTTCGCCG GTGGCGCACA GGCGGTGGGC AGTCCCGCAT GGTGCGACGC CATGGCCAAC
ACGCCCCAGG CCCAGTGGAC GATGAACGAC GCCTTCGCCT TTGCCAACCA CTGCGTGGGT
CGGTGA
|
|---|
| Protein sequence | MNTLPSFTVP AVAGLAFVLI TFSGCGQSND SAQAAEQHAP IQEEPDAPAM ERAIGFMESW
IELFDAMSAE LAGVDSQEAA NEHATWLTEE LTPRLEQLAG EMIIFMESIE EHEMELMEAS
FDAPENHQRM LELEGRMEQS LDRLEENIMR VESTYATPAL EVAWMNFART NERLERQMEA
TFAGGAQAVG SPAWCDAMAN TPQAQWTMND AFAFANHCVG R
|
|---|
| |