| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2080 |
|---|
| Symbol | |
|---|
| ID | 8807855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2199510 |
|---|
| End bp | 2200451 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003461307 |
|---|
| Protein GI | 289209241 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.246474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCC ACTCGCAGAA TGGACCCACC CCCTGGCCCG AACTCCCACC CCTCGATCAG
TGGGCGGATA CCTGCACGAC GGTCCACATG TGGACACAGA TTGTCGGCAA GATCCGTCTC
GAACAGGGGC CCTGGGTGAA TCACTCGTGG GGTTCCACGC TGTATGTCAC CAGCACCGGG
CTGACGACAT CGCCGATTCC CTATCAGGGG CAGACCTTCA CCATCGACTT CGATTTCGTT
GCGCACCAGC TGGTGATCAC CACATCGAAC GGCCGCAAGG TGGTCTTTTC GCTGGAACCG
ATGAGCGTTG CCGATTTCCA TGACAAGATC TTTGACGCAC TGGCGTGCCT CGGCATTCAA
GTACACATCC TTGCGCGCCC GGTGGAGGTG CCGGAAGCCA TCCCCTTTGC CAGGAACACA
CGAAACCGCA GCTATCATCG CCAGGCCATC CACGCTTTCT GGCAGGCACT GGTGCAGGTG
AACCGGGTGT TCTCGGAGTT CCGCGCGGGC TTTCTGGGAA AGTGCAGCCC CGTGCACTTT
TTTTGGGGTG CGTTCGATCT GGCCGTCACG CGCTTTTCCG GCCGCGAGGC GCCGAAGCAT
CCCGGAGGTG TCCCCAACTG TGCCGACTGG GTGATGGAAG AGGCTTATTC CCATGAGCTG
GCGAGCGCCG GCTTCTGGCC CGGCACGGGA CTGGGTGAAG CGGCTTTCTA TGCATATGCC
TACCCGGAAC CTCACGGATA TCGCGAGGCC GCCATCCAGC CCGCCGCGGC CCGCTTCCAC
GAAGGCCTCG GGGAATACAT CCTGCCATTC GACGCTGTTC GGGCGTCGAG CGATCCCGAT
GCGGCGCTGC TGAGCTTTCT GCAGAGCACC TACCAGGCGG CTGCCGACAA TGGCGGATGG
GACCGCGAAA CCCTCGAGTG CCTCCCTCCC AACCCGAAAT AG
|
|---|
| Protein sequence | MPAHSQNGPT PWPELPPLDQ WADTCTTVHM WTQIVGKIRL EQGPWVNHSW GSTLYVTSTG
LTTSPIPYQG QTFTIDFDFV AHQLVITTSN GRKVVFSLEP MSVADFHDKI FDALACLGIQ
VHILARPVEV PEAIPFARNT RNRSYHRQAI HAFWQALVQV NRVFSEFRAG FLGKCSPVHF
FWGAFDLAVT RFSGREAPKH PGGVPNCADW VMEEAYSHEL ASAGFWPGTG LGEAAFYAYA
YPEPHGYREA AIQPAAARFH EGLGEYILPF DAVRASSDPD AALLSFLQST YQAAADNGGW
DRETLECLPP NPK
|
|---|
| |