| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2061 |
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| Symbol | |
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| ID | 8807836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2178009 |
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| End bp | 2180522 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_003461288 |
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| Protein GI | 289209222 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0816695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAG ATCCGAGCGA GGCGCCGCAG GCCCGGGCGC TGGAAGATCT CCTGAATCCC
CTGGATGCTG CGCTGGAATC GCGCGGTGCC GCTGTGCTGG TGGCCGAGCC CGGTGCCGGC
AAGACCACCC GCGTCCCGCT GCATCTGGCC GCCTGCAACC GCGAGGACCG CGTGATCGTG
CTGCAGCCGC GCCGGCTGGC CGCGCGCATG GCGGCGACCT ATATGGCGGG GCAGCTGGGC
GAATCGGCCG GGCAGACGGT CGGCTACCGC GTGCGCGACG AGCAGAAGGT CTCCGAGCGC
ACCCGGGTGG AGCTGGTGAC CGATGGCCTG TTCCTGCGGC GCATCCAGGG CGACCCGCTG
CTGGAAGGGG TTGGTACGGT GGTCTTCGAC GAATTCCATC TGCGCCGGCC GGAGGCCGAG
CTGGCGCTGG CCTTTGCCCT GCAGGTGCGT CGGCTGCTGC GCCCGGAGCT GCGCATCGTG
GTGATGTCGG CGACCCTCGA CGACGAGGCC GTGGCCCGGC TGCTGGCCGG CCCGGAGGCA
GATGCCGTTG CGGTGCTGCG CGCCCGTGGG CGGCAGTTCC CGGTCGAGGT CCGTTATGCC
CCAACGGCGA AGGATGCGCC GCTGGCCGAC GGTGTGGCAC AGGCGGTTCG GGACGCGCTG
GCGGTGGAGC CGGGCTCGAT CCTGGTCTTC CTGCCCGGCG AGCGCGAGAT CCGCGAAGTG
GCCGCGCGCC TGGGCGAGGG GGTGGACACG CCTGCCGGCC CCGCGCGTAT CGCACCGCTG
TTCGGCCGGC TATCGGCCCA GGAGCAGGCC CGGGCCGTGC GCCCGGCGCC GGCGGGCGAG
CGCAAGGTGG TGCTGGCGAC CGATATCGCC GAGACCAGCC TGACCATCGA GGGCGTGCGC
GTGGTGATCG ACACGGGGCT TTCCCGCGAG CCGCGCTTCG ATGCCGCGAC CGGGCTCTCG
CGACTGGTGA CGCGGCCGGC CTCGAAGGCT GCCGCCGAGC AGCGGGCCGG GCGCGCCGGG
CGCACTGAGT CAGGGGTGGC GATCCGCCTG TGGTCGCGGG CCGACGAGGT CGCGCGCCCG
GACTATGCCA CCCCGGGGAT GCAGCAGGTG GACCTGCTGC CGCTGGCCCT GGAACTGGCC
GGTTGGGGCG AGGCGGTGGC CGAGCTGGAC TGGCTGGAGC CGCCGCCCGC GCAGGGCCTG
GCCTCCGCAC AGGCGGTCCT TGCGGAGCTG GGCGCGGTGG ATGCCGACGG GCGGGTGACC
GGGCACGGGC AGGCCCTGCT GCGCCTGCCG GCCCACCCGC GTCTGGCGCA TATGCTGTTG
CGGGGCCGGG AGCGGGGGCT GGCGCGCCTG GCCTGCGAAC TGGCGGTAGC CGTGGAAGAA
CCCGGCGTGG CCGGGCCGGA GCCACCGCTG GAGCTGGGCG CGCGCCTGGA GCGCGCGCGC
CGCTCGGGTG GCCGGGCCTG GCCATCCGGT CTGCGGCGTC TGGAGCAGGC GCTGGCACGC
GTCGGGGGCC GCCCCGTTGG CACGGAAGCA GTGCTGGACG AAAGTTCGGC GCTGGGCGTG
CTGGCGGCGC TGGCCTGGCC GGAGCGCATC GCGCGGCGTC GCGGCGAGGC GGCCGGGCGC
TTTGTGATGG GGAACGGTCG CGGCGCGTGG CTGCCGGAAC GCGAGCGTCT GGCGCATACC
GACTACCTGG TCGCGGTGGA CTGCACGGAT GCCGACCGCG AGGCGCGCAT CCGCTGTGCG
GTGGCGCTGG ATCTGGCCGC ACTGGAGCAG GAGGCCCCGG AACTCTTCCA TCGCGAGACG
CGCTGCGACT GGGTGGAGGA TGGCGCACGG CTGGAGAACG CGCGGGTCCG GCGGATCGGC
ACGCTGGTGG TGGAGCGGCA GATGGTCGCG CTGGACGACC CCGCCGCCAC CATCCCGCGC
TGGTGCGAAC GGCTGCGCCG CGAGGGCCTT GCGCTGCTGC CCTGGGATGA CACCGCGACC
CAGCTGCGCG CGCGCATCCA GCTGTTGCAC GAGGCGATGC CCGAGGGCGG CTTTCCGGAT
CTGCGCGACA CCGCGCTGCT GAGGGCCCTT GAGGACTGGT TGGGGCCGTA TCTGGCCGGG
ATCACACGGC GTCGGGATCT GGAGCGGCTG GACCTCGCAG CGATCCTGCG CGCGCGGCTG
GACTGGGATC ACCAGCAGCA ACTGGAGCGG GAGGCGCCGG CGCGGATCGA GGTCCCCTCT
GGTTCCGCCC ATCGCATTGA TTACACGCAG GACCCCCCGG TGCTGGCGGT GAAGCTGCAG
GAGCTGTTCG GCCTGGGCGA GACACCCCGG GTAGCGGGCG GCCGCATGGC GCTGGTGCTG
CACCTGCTGT CGCCGGCGCG GCGCCCGGTG CAGGTCACCC AGGATCTGAA GAGCTTCTGG
GAGAACGGCT ATCCCGACGT GCGCCGCGAG CTCAAGGGGC GCTATCCAAA ACACCCCTGG
CCGGAGGATC CATGGAATGC GCCGGCCACG CGGCATACGA AGCGGCGCGG GTAG
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| Protein sequence | MSKDPSEAPQ ARALEDLLNP LDAALESRGA AVLVAEPGAG KTTRVPLHLA ACNREDRVIV
LQPRRLAARM AATYMAGQLG ESAGQTVGYR VRDEQKVSER TRVELVTDGL FLRRIQGDPL
LEGVGTVVFD EFHLRRPEAE LALAFALQVR RLLRPELRIV VMSATLDDEA VARLLAGPEA
DAVAVLRARG RQFPVEVRYA PTAKDAPLAD GVAQAVRDAL AVEPGSILVF LPGEREIREV
AARLGEGVDT PAGPARIAPL FGRLSAQEQA RAVRPAPAGE RKVVLATDIA ETSLTIEGVR
VVIDTGLSRE PRFDAATGLS RLVTRPASKA AAEQRAGRAG RTESGVAIRL WSRADEVARP
DYATPGMQQV DLLPLALELA GWGEAVAELD WLEPPPAQGL ASAQAVLAEL GAVDADGRVT
GHGQALLRLP AHPRLAHMLL RGRERGLARL ACELAVAVEE PGVAGPEPPL ELGARLERAR
RSGGRAWPSG LRRLEQALAR VGGRPVGTEA VLDESSALGV LAALAWPERI ARRRGEAAGR
FVMGNGRGAW LPERERLAHT DYLVAVDCTD ADREARIRCA VALDLAALEQ EAPELFHRET
RCDWVEDGAR LENARVRRIG TLVVERQMVA LDDPAATIPR WCERLRREGL ALLPWDDTAT
QLRARIQLLH EAMPEGGFPD LRDTALLRAL EDWLGPYLAG ITRRRDLERL DLAAILRARL
DWDHQQQLER EAPARIEVPS GSAHRIDYTQ DPPVLAVKLQ ELFGLGETPR VAGGRMALVL
HLLSPARRPV QVTQDLKSFW ENGYPDVRRE LKGRYPKHPW PEDPWNAPAT RHTKRRG
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