| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2029 |
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| Symbol | |
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| ID | 8807804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2148430 |
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| End bp | 2150106 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003461256 |
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| Protein GI | 289209190 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAACG TCGCGACCCG AGGACCCTTC AAGGGGCTGA ACCCGCGTGT GGCCCCGATC
GCGCTGCTGC TGGTGGTGCT GATCGCGCTG TTTGCGATCT ACCGCACCGA GCAGCTCGAA
CGGGTCGTCT TTGATACCCG CGCCTTTCTG ACACCCTTTC TCGAGTGGTA CTACGTGGTC
GCGATGGCCC TGTTCCTGGT CATCGTGATC TGGCTGGGGG TCGGGCGTTA CAAGAACGTG
CGCCTGGGGC GCGACGACGA GGTACCGGAG TTCACCACGG TGTCGTGGCT GGCGATGCTG
TTCGCCGCCG GCATGGGCGT GGGCCTTCTG TTCTGGGCGG TGGCCGAGCC GCTCAGCCAC
TACGGGGGCA ACCCGTTCCT GCTGGACAAT GGCGAGACGG CCGAGGCCGC CGACATGTCC
ATGGTGCTGA CCTATTTTCA CTGGGGTCTC AATGCCTGGG CGGTGTTTGC CCTGCTGGCG
CTCATCCTCG CCTATTTCGG CTTCCGCAGG GGGCAACCGC TGGCGCTTCG TTCCGCGCTG
CATCCCCTGA TCGGAAAGTA CAGCCATGGC TGGCCCGGCG ATATCGTGGA TCTGCTGGCC
ATCCTCGCCA CCGTGTTCGG GATCGCGACC ACCCTGGGGC TGGGTATTCA GCAGCTGGAC
ACCGGGTTGG TGCATACCCT GGGGATTTCC GGCGGCGAAA ATGGACAGCT GTTCCTGGCG
GCGCTGCTGA CGGTGATTGC GATTGTTTCG GTGATTACCG GTGTTCAGGT CGGCGTGCAG
CGGGTCTCGC AGGCCAATAT GTGGCTGAGC GTGGCCCTGA TGGGACTGCT GCTGATATGG
GGGCCGACCC AGTACCTGCT GGCGTTGTTC GTCCAGTCCT CCGGCAGCTA TTTGCAGAAT
CTGCTGGGGC TTTCGCTGTA CACCCACGCC CATCAGACGG ATCCCTGGCA CTCCGACTGG
ACAGTGTTCT ACTGGGGCTG GTGGCTGGCC TGGGCCCCGT TCGTCGGGCT GTTTATCGCG
CGCATCTCGC GCGGGCGCAC GCTGCGCGAA TTCGTCCTGG GCGTGTTGCT GGTGCCCACG
GTTATCACCT TTTTCTGGCT GTCCATGCTG GGCGGTACAG CCCTGTACGC GGAGGTCAAC
GGGGTCGCGG ACATTGCCGA CAAGGTCTCC GAGGACCTGA CCATGGCGAC CTTTGCGACC
ATGGACACGC TGGAGCCCTG GCTGGTGGCG AAGATCGGGG GCGGGCTGAT CACGATCCTG
ATCGCCACCT ACCTGTTGAC CTCGGCCAAC GCCGGGATCG TCGTGATCAA CACCCTGCTG
GCTCACGGTT CTACCGTGCA TCGCAAGCGG CACCTGACCA TCTGGGGTGC CCTGATTGGC
CTGATCACCG CGGTGCTGTT GCTGGCGGGC GGGCTGGAGG TCCTGCAAAG CGCGGTGATC
CTGGCCGCCC TGCCATTTTC GCTGGTGATC CTGATGATGA TCGTCGGGCT GATCCGGGGG
CTGGAGCAGG AACGCTGGGC CCCACGCCCG GGCGAGCGGA CGGTTCTGCC CAGCGAGCCC
TGGCAGGTTC CGGCGGATCG CATGAACGAG GACTATGACA GCGAGGATGA TGCGCCCGAA
TCCGGCCCGG ACGATGACGG CAAGGACGAG CGCGAGCCAC CGCCACGGCC GTGGTGA
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| Protein sequence | MYNVATRGPF KGLNPRVAPI ALLLVVLIAL FAIYRTEQLE RVVFDTRAFL TPFLEWYYVV
AMALFLVIVI WLGVGRYKNV RLGRDDEVPE FTTVSWLAML FAAGMGVGLL FWAVAEPLSH
YGGNPFLLDN GETAEAADMS MVLTYFHWGL NAWAVFALLA LILAYFGFRR GQPLALRSAL
HPLIGKYSHG WPGDIVDLLA ILATVFGIAT TLGLGIQQLD TGLVHTLGIS GGENGQLFLA
ALLTVIAIVS VITGVQVGVQ RVSQANMWLS VALMGLLLIW GPTQYLLALF VQSSGSYLQN
LLGLSLYTHA HQTDPWHSDW TVFYWGWWLA WAPFVGLFIA RISRGRTLRE FVLGVLLVPT
VITFFWLSML GGTALYAEVN GVADIADKVS EDLTMATFAT MDTLEPWLVA KIGGGLITIL
IATYLLTSAN AGIVVINTLL AHGSTVHRKR HLTIWGALIG LITAVLLLAG GLEVLQSAVI
LAALPFSLVI LMMIVGLIRG LEQERWAPRP GERTVLPSEP WQVPADRMNE DYDSEDDAPE
SGPDDDGKDE REPPPRPW
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