| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2000 |
|---|
| Symbol | |
|---|
| ID | 8807774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2124795 |
|---|
| End bp | 2125610 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_003461227 |
|---|
| Protein GI | 289209161 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGC TCCCCGAGGT CGAGACCACC CGGCGCGGGC TGTCGCCTCT TCTTGAAGGC
CAGACTATCG AATGGCTCGA GGTACGCAAT GGGCGCCTGC GCTGGCCCGT ACCGGAGGAA
TTGCCCGGGC GTCTGGCCGG GGCCCGCATC ACGACACTGG CGCGACGCGC CAAATACCTG
CTGCTGAACA CCGATCGTGG CGGGGCACTA TTGCATCTTG GCATGTCCGG CTCGCTGCGC
CACTGCATGC CGGGCGTCCC GCTGCGCACG CACGATCACC TGATCCTGCA TCTGACGAAC
GGCGCGCAGG TGCGCTTTCA TGATCCGCGC CGCTTTGGAT GTTGCCTGCC GCTGCCGGAG
ACCGGCGAGC CACATCCCCT GCTGGCCGCA CTGGGGCCGG AGCCCCTGGA CGCCACATTC
AACGGCGACC ACCTGTTCCG CCGCAGCCGC GGGCGCCGGG GTCCGATCAA GGCCTTCATC
ATGGATCAGG ATGTCGTGGT CGGCGTGGGC AACATCTATG CGACCGAGGC GCTGTTCCTG
GCCGGAATCC GTCCGGGGCG GGCCGCCGGG CGCGTGACCC GGGCGGAATA CGAACGACTG
GCCGGATTCA TCCGCACCGT GCTGGGCGCG GCGATCGAAC AAGGCGGCAC GACCCTGCGC
GACTTCCTGC GCGAGGACGG GACCCACGGG TACTTTCGCC AGTCACTGCG GGTCTACGGA
CGCGCCGGAG AGCCGTGCCT GGAGTGTGCG ACACCGCTGC GCAACCGACG CATCGGGCAG
CGCGCCTCGG CGTACTGCCC GACCTGCCAA CGGTAG
|
|---|
| Protein sequence | MPELPEVETT RRGLSPLLEG QTIEWLEVRN GRLRWPVPEE LPGRLAGARI TTLARRAKYL
LLNTDRGGAL LHLGMSGSLR HCMPGVPLRT HDHLILHLTN GAQVRFHDPR RFGCCLPLPE
TGEPHPLLAA LGPEPLDATF NGDHLFRRSR GRRGPIKAFI MDQDVVVGVG NIYATEALFL
AGIRPGRAAG RVTRAEYERL AGFIRTVLGA AIEQGGTTLR DFLREDGTHG YFRQSLRVYG
RAGEPCLECA TPLRNRRIGQ RASAYCPTCQ R
|
|---|
| |