| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1971 |
|---|
| Symbol | |
|---|
| ID | 8807745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2092255 |
|---|
| End bp | 2093226 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_003461198 |
|---|
| Protein GI | 289209132 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCAGTA ACCGGTGCCG CCCTGGCGCG GTCGTCGCCG CGCCGGCGGT GTTGTTCGCG
CTGGCGCTGG CGGGGTGCTC GTCGACCCCC GACCGCGAGG CAGACCCGGA CCGCCCGCTG
GGCGATGCGG CCTATGACGC CTACCCGGAC CCGGAGGATG TCCCGCAGGA TCTGGCCCTG
ATCCCCGACG CGGTGCCGAC CGACGAGCCC CCGAGTCGCT ACGGGAACCC GCCCGAGTAC
GAGGTCTTCG GGCAGCGTTA CCGTACCCTG CGCACCAGCA CCGGGTTCGA GGAAGAGGGC
CTGGCCTCCT GGTACGGAAC CAAGTTCCAC GGCCGGCGCA CCTCCAGCGG GGAACCCTAC
GACATGTATG CGATGACGGC AGCCCACAAG ACACTGCCGC TGCCGACCTA TGTCGAGGTC
GTGAACCTGG AGAACGACCG CCGCGTGATT GTGAGGGTCA ACGATCGCGG GCCCTTTGTG
GACGAGCGCA TCATCGACCT CTCCTATGCC GCGGCGCATC GGTTGGACAT GACCGACGCC
GGTGTGGCCC CGGTGCGCAT TCGTGCCGTG GGGCCGGAAG ACGTCGATTC GCCGCGTGTG
GCCGAATCGC GCCCGCCAGT GCCGGAACCC ATCGAGCTGG CCGAGGCCAG ACAGGGGGGC
GGCAGCAGCC CCGTTGCGGC ATCCTCTGAT GACGCGCGCG CTGCTACCGC AGCGAATGCC
CCAGAGGCCG CCGCGAACAA TGGCCGCTGG GTGCAGGTCG GGGCGTTTTC CGAACGCCGA
ACGGCGGAGG AGATCCAGCG CGATCTGGAG GCCCTCGGAT TCGAGTCGGT CGAGATCTCG
ACGCTGGAAC GCGACGAGCA GGCGGATCTG CATCGGGTGC GCATCGGCCC GCTGGAAGAG
GTCGAGCTGC AGGAGGCGAC CGAGCGCCTG CAGGAGGCCG CCCACGTCGA CTACCGCATC
GTCGACGACT GA
|
|---|
| Protein sequence | MPSNRCRPGA VVAAPAVLFA LALAGCSSTP DREADPDRPL GDAAYDAYPD PEDVPQDLAL
IPDAVPTDEP PSRYGNPPEY EVFGQRYRTL RTSTGFEEEG LASWYGTKFH GRRTSSGEPY
DMYAMTAAHK TLPLPTYVEV VNLENDRRVI VRVNDRGPFV DERIIDLSYA AAHRLDMTDA
GVAPVRIRAV GPEDVDSPRV AESRPPVPEP IELAEARQGG GSSPVAASSD DARAATAANA
PEAAANNGRW VQVGAFSERR TAEEIQRDLE ALGFESVEIS TLERDEQADL HRVRIGPLEE
VELQEATERL QEAAHVDYRI VDD
|
|---|
| |