Gene TK90_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1949 
Symbol 
ID8807723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2071759 
End bp2072529 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID 
Productsignal peptidase I 
Protein accessionYP_003461176 
Protein GI289209110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAATC TGGAACTGAT CCTGGTACTG GCCACGGCCG CAACGGGCCT GATCTGGCTG 
GGCTGGGTGC TCCTGCGGCG GCGGTTGAGC CCCGAGCGCC AGGCGCGCAT GCCGTGGTTC
GTGGACTATT CGCGTTCGTT CTTCCCGGTG CTGCTGATCG TGCTGGTGCT GCGGTCGTTC
GTGGCCGAGC CGTTCCGTAT CCCGTCGGGC TCCATGATGC CGACCCTTCT GGTGGGCGAC
TTCATCATGG TGAACAAGTT CTCCTACGGG ATCCGCCTGC CGGTTACGCG TACGAAGGTC
CTGGACATGG GCGAGCCCGA GCGTGGCGAG GTCGTGGTGT TCAAGTACCC CCGCAACCCG
CAGGAGGACT ACATCAAGCG CGTGATCGGG CTGCCGGGCG ACACCATCGA GTTCCGCGAT
CGCGTGCTCT ACGTCAACGG CGAGGCACAA TCGGCCGAGC GCGTGGGGAC CTTCGAGGGC
GAGGGGTCCG GGGAAATGAT GTCCGGCGCC TCGCTGTACG AGGAGACCCT CGACGGGCGC
ACCTACACGA CGCTGATGCG CGAGGAACGC CCAAGCCTGG ATGGCTCGGT GACGGTCCCC
GACGGTCACT ACTTCATGGT CGGCGACAAT CGCGACAACT CGAACGACAG CCGGACCTGG
GGTTTTGTCT CCGAGGACCT GCTGGTGGGG CGTGCCCTCT TTATCTGGCT GCATTGGGAT
TACAATGAAG GGCACAGGGA CTTTTCCCGG ATTGGCCAGG CAATTCGTTA G
 
Protein sequence
MANLELILVL ATAATGLIWL GWVLLRRRLS PERQARMPWF VDYSRSFFPV LLIVLVLRSF 
VAEPFRIPSG SMMPTLLVGD FIMVNKFSYG IRLPVTRTKV LDMGEPERGE VVVFKYPRNP
QEDYIKRVIG LPGDTIEFRD RVLYVNGEAQ SAERVGTFEG EGSGEMMSGA SLYEETLDGR
TYTTLMREER PSLDGSVTVP DGHYFMVGDN RDNSNDSRTW GFVSEDLLVG RALFIWLHWD
YNEGHRDFSR IGQAIR