Gene TK90_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1945 
Symbol 
ID8807719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2069030 
End bp2069689 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID 
ProductRecombination protein O RecO 
Protein accessionYP_003461172 
Protein GI289209106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCG CGGCGACGGC GGTCACCCAG GGTGTAGTGC TGCATGCGCG TGCACTGCGC 
GAAAACAGCC GTGTGCTGGA ACTGCTGACG GGCGAGGCCG GGCGGGTGGC GGCGGTGGTA
CGTGGCAAGG CGGGGTCGGT ACAGCCCTTT GTGCTGCTGG ATCTGGCCTG GCGCGGTCGT
GGCGAGCTTC CTACGCTTCA GGTGGCGGAG CAGCAGAGGG TCTTCCCGTT GACCGGGCGG
ACGCTGGTTT GTGGTTTGTA CCTGAACGAA CTGGTATTGC GCCTCTATCC GCGCGAGGCC
CCCATCCCCG AGGCGCTGCC GGCCCTGCTG ACGGCCTACG CGCGGCTGGC GGCCCGGGAG
CGGGCAGACG TAGTGTTGCG CCGCGCCGAG TGGGCGTTGC TGCTGCCGAT CGACTCCGGG
CTCGAGCATG TCGATGCCGC CGAGCTTGAA CCGGCGGTCT GGTATCGGTA CGAGCCCGAG
ATGGGGCTGG AGCCCACGGC ACCGGGGCGC GCGGGCGCCA TCGCCGGGGA GGCCCTGGTG
GCGCTGGCTT CGGGGCAGTC GGTCCCCGAT AATTATGCCC GCCCGGCGCG TGACTTCATG
CGCGCCCTGA TTGACCATCA CCTGGCCGGT CGCGCGCTGC GCACGCGAGC GCTGCTGTAG
 
Protein sequence
MSGAATAVTQ GVVLHARALR ENSRVLELLT GEAGRVAAVV RGKAGSVQPF VLLDLAWRGR 
GELPTLQVAE QQRVFPLTGR TLVCGLYLNE LVLRLYPREA PIPEALPALL TAYARLAARE
RADVVLRRAE WALLLPIDSG LEHVDAAELE PAVWYRYEPE MGLEPTAPGR AGAIAGEALV
ALASGQSVPD NYARPARDFM RALIDHHLAG RALRTRALL