Gene TK90_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1906 
Symbol 
ID8807679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2021689 
End bp2023089 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content67% 
IMG OID 
ProductRNA-metabolising metallo-beta-lactamase 
Protein accessionYP_003461133 
Protein GI289209067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAC TGACCTTTCA GGGGGCGACC GGCGAAGTCA CCGGGTCGCG TTATCTCCTC 
GAGACCGACG ACGCCCGCAT CCTTCTGGAA TGCGGCCTGC ATCAGGGCAA CAGCGAGGCG
GACGAGGCGA ATCGCGCCTC GCTGACCGAG CTGGCGGAAA CGATCAATGC GGTGATCCTG
TCGCACGGGC ATCTGGATCA CTCGGGGCTA TTGCCCAAGC TCGTGCGCGA CGGCTACCGC
GGGCCGATCT ACTGCACACC GGGCACGGAG GAGCTGCTCG AGATCATGCT CGAGGACGCC
GCGTTCGTGA TGAGCAAGGA CATCGAGTGG GAGAACAAGT GGCGCCGCCG CGCGGACAAG
CCCCTGCTGG AGCCAATCTA CGACATCGAT GATGTCGCAA CCACGCTGGG ACTTTGCCGG
GCCATCCCCT ACGGCGACAC CCACACCATC GCGGGCGATG TCCGACTGAC CTTTCGCGAT
GCCGGGCATA TCCTCGGTTC AGCCATCGTG GACCTGATCG TGCCATCCGG CGGGCGCGAC
CGGCACCTGG TCTTCTCCGG AGACCTCGGC AATGCCGACG CGGTCCTGAT GCACGCTCCG
ACCCGCCCGG AACACGCGGA CCACGTGCTG CTGGAGAGCA CCTATGGCAA CCGCGACCAC
CGCCCGATGG ACGAGACGGT CGAGGAATTT GCTCAAGTGC TGGCCGAGGC CGACAAGAGC
GGCGGCAACG TGCTGATCCC GGCCTTCGCC GTGGGGCGCA CGCAGGAGAT CCTCTACCAC
CTGAGCATGC TGCATCACGC CGGCCGCCTG CCGCAGCAGA AGGTCTTCCT CGACAGCCCG
ATGGCCATCA AGGTCACCGA GCTCTACGCC CGCCTGCGCC GGACGCTGGA CCCGGAGGAC
ATGGACCGGC TGCACCAGGC CGCGAACGGC GACCCGAACG GCTATCTGCC CGGGCTTCAG
GTCTGCCGCA CGGTGGAGGA ATCCATGGCG ATCAACCGCA TCACCGGTGG CGCGATCATC
ATCGCCGGCT CCGGCATGTG CAACGGCGGA CGCATCCGTC ACCACATGAA ATACAACCTG
TGGCGACGCG AGGCGCACCT GGTGATCGTC GGCTTCCAGG CGGCGGGTAC GTTGGGACGG
CGGCTGGTGG ACGGCGCCGA GAAGGTCAAG CTGCTGGGCG AAGACGTTGC AGTGAACGCG
AAGGTCCACA CCCTGGGCGG CTTTTCCGCC CACGCCGGGC GCAGCCAGCT GCTCGACTGG
GCACGCGGTT TTCAGCACCA GCCGGTGTTC CATCTGGTCC ACGGCGAGCC AGAAGCGCGC
GAGGCCCTGG CCGCCGGCCT GCGCGACGAG CTAGGGGCCG AGGCGCATGT ACCCGCCTTC
GGCGAGACCA TCACCCTGTA G
 
Protein sequence
MAQLTFQGAT GEVTGSRYLL ETDDARILLE CGLHQGNSEA DEANRASLTE LAETINAVIL 
SHGHLDHSGL LPKLVRDGYR GPIYCTPGTE ELLEIMLEDA AFVMSKDIEW ENKWRRRADK
PLLEPIYDID DVATTLGLCR AIPYGDTHTI AGDVRLTFRD AGHILGSAIV DLIVPSGGRD
RHLVFSGDLG NADAVLMHAP TRPEHADHVL LESTYGNRDH RPMDETVEEF AQVLAEADKS
GGNVLIPAFA VGRTQEILYH LSMLHHAGRL PQQKVFLDSP MAIKVTELYA RLRRTLDPED
MDRLHQAANG DPNGYLPGLQ VCRTVEESMA INRITGGAII IAGSGMCNGG RIRHHMKYNL
WRREAHLVIV GFQAAGTLGR RLVDGAEKVK LLGEDVAVNA KVHTLGGFSA HAGRSQLLDW
ARGFQHQPVF HLVHGEPEAR EALAAGLRDE LGAEAHVPAF GETITL