| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1891 |
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| Symbol | |
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| ID | 8807664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2005979 |
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| End bp | 2008771 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_003461118 |
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| Protein GI | 289209052 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA CCAGGGGGAC TACCGGGGAG GCCACGGAAC CGGCCGACAA CGCGGCCGAG
ACTGCTCAGG AACTGGAGTC CGGTGCGCGT CACCCGGGGC GCGGCACACG CAGCCTGATC
TGGCTGACTG CAGTGGCCTG GTCGCTGTTC CAGATCTGGA TCGCCTCACC CCTGGGCGAC
TGGCTGGATT TCTTTGTCGT CTCGGATACC GAGGCGCGCT CGATCCACCT GGCCTTTGCG
GTATTCCTGG CCTACCTGCT GTTTCCGGCG ATCCGCCCGG GCACGCGCCA CGTGTCCTGG
TCGCGCGCCA TTGGCGTGAC CTACGCCCTG GGCGGGCTGA TCCTGATGGC GTTCGGGATC
TGGCAGTTGC TGGGTCTGGA GCGCCTGGCC GAGGTCTACG TAATCATCGG ACTGACCCTG
CTGGTGATCG CATTGCCGCT GCTGCGCGGC CATGACCCGA TCCACCACAT ACCGCTGACC
GACTGGATGT TCGCGGCGAT CGCGGCCTTC AGCGCGCTGT ACCTGTACCT GTTTCATGCC
GAACTGGCCG ATCGCCCCGG GGCGCCCTCG GACGTCGATC TGATCGTCGC CGGGATCGGC
CTGATCCTGC TGCTGGAGGC CACCCGGCGG GTACTGGGTC CGGCGCTGAC GATCATCGCC
GCGATCTTTT TGTTCTACAC CTTCGCCGGC CCGATCATGC CGGACATCAT TGCCCATCGC
GGCGCCAGCT ATCCCCGCGC GATGGCGCAG CAGTGGCTGT CCAACGAGGG GGTGTTCGGG
ATCGCGCTGG GGGTCTCGAC CAGCTTCGTG TTCCTGTTCG TGCTGTTCGG CGCGCTGCTG
GAGCGCGCCG GGGCAGGCGA CTACTTCATC CGGGTCGCGT TCTCCCTGCT CGGGCACATG
CGCGGAGGCC CGGCCAAGGC GGCCGTAATG GCCTCGGGGA TGACCGGGGT GGTGTCGGGT
TCGTCCATCG CCAACGTCGT CACCACCGGG ACCTTCACCA TCCCCCTGAT GAAGCGGGTC
GGCTTCAGCC CGCACAAGGC CGGGGCCGTC GAGGTGGCCA GCTCCGTGAA CGGACAGCTG
ATGCCACCCG TCATGGGGGC CGCCGCGTTC CTGATGGTCG AATACGTCGG CATCCCCTAT
GTCGAGGTCC TCAAGCACGC GATCCTGCCG GCCCTGATCG CCTATATCGC GCTGATCTAC
ATCGTGCACC TGGAGGCCTG CAAGAACGGC ATGGAGGGCC TCAAGCGCGC TACCGTCACC
ACCTGGCGCG GCCGCCTGAT CAGCTTCGGG ATCACGGTCT CCAGCCTGGT CATACTGGCG
GGCGCCGTCT ACTGGGGGCT TGGCTGGATC AAGGACGTGG CCGGCGACGC GGCCGCCTGG
ATCATCGCCG CCCTGCTGTT TACCGCCTAC CTGGTGCTGC TGTGGATTGC CGCTCATGAA
CCGGAAGCGG CGCCACTGGA TACCGAGCGT CCGCTGCCGC GCGTGCTGCC CACGGTGCTG
GGCGGGCTGC ACTACGTGCT GCCGCTGGTG GTACTGGTCT GGGCGCTGGT CGTGGAGCGC
CTGTCGCCGG GGCTTTCGGC CTTCTGGGCC GTCGCGTTCA TGATCTTCAT CGTGCTGACT
CAGCGGCCAC TGGTCGCACT GTTCCGGCGC CAGGGCCGGC TCGCACAGGC GGCCTGGGTC
GGCGTATGGG AGCTGTTCCA GGGTTTCGAG ACCGGCGCAC GCAACATGAT CGGCATCGGT
GTCGCGACCG CAGCGGCCGG GATTATCGTC GGTACCGTCG CGATGACCGG GGTCGGGCTG
GTGCTGACCG ACCTGGTCGA CACCCTCTCT GGCGGCAACC TGCTGCTCGT GCTGTTCCTG
ACCGCGCTGA TCAGCCTGGT GCTGGGCCTG GGACTGCCGA CCACCGCGAA CTACATCGTG
GTCGCGACCC TGATGGCCCC GGTGATCGTG GAGCTGGGCG CCCAGAACGA CATCCTGATC
CCGCTGATCG CCGCGCACCT GTTCGTGTTC TACTTTGGCA TCATGGCGGA CGTGACACCC
CCGGTGGGGC TGGCCTCGTT CGCCGGAGCG GCCGTGGCGA AGGCGGATCC GATCCGCACC
GGGATACAGG CCTTCGCCTA CAGCCTGCGC ACCATCGCGC TGCCATTCTT CTTCATCTTC
AACAGCCAGC TGCTGCTGAT CGGCGTGGAC AACGTGTTCC AGTTGCTGCT CGTCTTCCTC
GGCTCGCTGG CCGGCATTCT CCTGTTTACC GCGGCGACCC AGGGCTACTT CCTGACCCGG
AGCCGCCGCT GGGAATCGGC GCTGCTGCTG GTCAGTGCGT TCGTGCTGCT GGCCCCGACC
GTACTGATGG ATCGGGTAGC AGAGCCCCAT GAGCGAATAC CAGCCGAACA GCTGTTCGAG
GTCGTCGAGA CCATCCCGGA TCGCGAATCC CTGCGGGTGG AGGCCACCGG TATCGACCTG
GAGGGCCGTG AGATCACCCG CACCGTGATG TTCCCGCTGG GCGACCCGGA TCTGGAGCCG
CGCGAACGCC TGTCCGATGC CGGCCTCGAC GTCTCCTTTG ACGAAGACGC GGAAAAGGCC
CGCATCCAGA CGGTTGCTTT TGGCAGTCCG GCCGGCCGGG TAGGCTTGGA AGGCGGCTGG
ACGATCACCA GCGTGCTCGT GGAGACCGAC CGTCCCAGCC CCTACTGGTG GTACCTCCCG
GGTCTCCTGC CGGCGCTGCT GGTGGCCTGG AACCAGCGCC GCCGCGAGCC GCCCTCCGGG
CCGACCGCGG CGGCACCAGC GCTCAGCGCC TGA
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| Protein sequence | MSETRGTTGE ATEPADNAAE TAQELESGAR HPGRGTRSLI WLTAVAWSLF QIWIASPLGD
WLDFFVVSDT EARSIHLAFA VFLAYLLFPA IRPGTRHVSW SRAIGVTYAL GGLILMAFGI
WQLLGLERLA EVYVIIGLTL LVIALPLLRG HDPIHHIPLT DWMFAAIAAF SALYLYLFHA
ELADRPGAPS DVDLIVAGIG LILLLEATRR VLGPALTIIA AIFLFYTFAG PIMPDIIAHR
GASYPRAMAQ QWLSNEGVFG IALGVSTSFV FLFVLFGALL ERAGAGDYFI RVAFSLLGHM
RGGPAKAAVM ASGMTGVVSG SSIANVVTTG TFTIPLMKRV GFSPHKAGAV EVASSVNGQL
MPPVMGAAAF LMVEYVGIPY VEVLKHAILP ALIAYIALIY IVHLEACKNG MEGLKRATVT
TWRGRLISFG ITVSSLVILA GAVYWGLGWI KDVAGDAAAW IIAALLFTAY LVLLWIAAHE
PEAAPLDTER PLPRVLPTVL GGLHYVLPLV VLVWALVVER LSPGLSAFWA VAFMIFIVLT
QRPLVALFRR QGRLAQAAWV GVWELFQGFE TGARNMIGIG VATAAAGIIV GTVAMTGVGL
VLTDLVDTLS GGNLLLVLFL TALISLVLGL GLPTTANYIV VATLMAPVIV ELGAQNDILI
PLIAAHLFVF YFGIMADVTP PVGLASFAGA AVAKADPIRT GIQAFAYSLR TIALPFFFIF
NSQLLLIGVD NVFQLLLVFL GSLAGILLFT AATQGYFLTR SRRWESALLL VSAFVLLAPT
VLMDRVAEPH ERIPAEQLFE VVETIPDRES LRVEATGIDL EGREITRTVM FPLGDPDLEP
RERLSDAGLD VSFDEDAEKA RIQTVAFGSP AGRVGLEGGW TITSVLVETD RPSPYWWYLP
GLLPALLVAW NQRRREPPSG PTAAAPALSA
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