Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1855 |
Symbol | |
ID | 8807627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1968995 |
End bp | 1970758 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_003461082 |
Protein GI | 289209016 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.225715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.416564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACC AGGTTCTGGC CCGCAAGTGG CGTCCCGGTC GTTTCGAGGA CCTGGTCGGG CAACCGCATG TGGTGCGGGC CCTGGCCAAT GCCCTGAGCG GGGATCGTCT GCATCATGCC TACCTGTTCG CCGGAACCCG TGGGGTAGGC AAGACCACGA TCGCCCGAAT TCTCGCACGC TGCCTGAACT GTGAAACCGG TATCACTGCG ACCCCTTGCG GCGAATGCCG CAGTTGCGTG GAGATCGCGG AGGGTCGGCA TCTGGACCTG ATTGAGGTCG ATGCCGCGTC GCGCACTCGC GTGGACGATA CCCGGGAGCT GCTGGACAAC GTCTCCTACG CCCCGACGGC GGGCCGCTTC AAGGTGTACC TGATCGACGA GGTGCACATG CTCTCCGAGA AGAGCTTCAA CGCCCTGTTG AAGACGCTGG AAGAGCCGCC GGATCACGTC AAGTTCCTGC TCGCCACGAC CGATCCGCAG AAACTGCCGG TCACCGTGCT GTCACGCTGC CTGCAGTTCA ACCTCAAGCC GATGCCGCCG GCGCTGATCG CCGAGCACCT GACACGCATC CTCGAGGCCG AAGGCCTGCA GGCCGAGCCG GGCGCGCTGC TGCGTCTGGG CGAGGCGGCC GAGGGGTCCA TGCGCGACGC GCTGAGCCTG ACTGATCAGG CCATCGCCTA TGGCGGCGAC CGCCTGACCG AGTCCGATGC CTGCGACATG CTGGGCCTGC TGCCGCGTAC CCGCTTGACC GGGCTGCTGG ATGCGGCCTT TGCCGGTGAT GGCCCGGGTC TGATGCAGGG TCTGCAGGAG CTCAAGGGCC TGGGGCCCGA CTGGTCGCGC CTGCTGGACG AGCTGGCGGC CCTCGTGCAT CGCGTGGCCG TGGAGCAGTT GGTGCGTGGT GAGGGCGGTG CCGAGGACGA CGATGCCGCC GAGCGCTGGG CGCGCGAGAC CGCAGCCCGG ATAGACGCGG AGACCCTGCA ACTGACCTAC CAGATCCTGA TTCACGGGGC CCGCGATCTG CCCTGGGCGC CGGATGCGCA GATGGGGGTG GAAATGACCC TGCTGCGTTT GCTGGCGTTT CGGCCGGAAG GTCCCGGCGA GGGTGCCGTG TCCGTTGAGC GCCAGGGCGG GACCCCGGCC ACCGCACCGC GAACTGGCCC GAGTGCGGAT CCGGCCACGG CCCGGCCCGA CGCCACGATG CGGTCGGCTC CGCCCCCCAT CCCGGAGCCG CCGCGCGAGC GGGCTCAGGA GCGGGTGCGC GAGCCGGACC CCGGTTCGGA TATCGGACTG AACGAGTCTG CGCCGCGCCC CCGGGATGCC GAGCCTGTCA GGTCCCCGGA GCCGGACTCC GGGCCCTTTG ACTGGCATCG CTTCGCTGAA GGTCTGCCGA CCGGCACGGT GCGAGAACTC GCACTACATG GCGAATTGCA GCAACTGGAT GACGAAAGCG TCGTGATCGC CGTAGCCCCG GGTACGCTCT ATACCGATCG AACCCGCACG CGCCTGAAAG AGGCCCTCGA AACACGCCTC GGGCACTCGG TGCGGCTGGA GATTGTCGAC CAGACACAAC CCTCGCAGGC CACGCCCGCT GCGCGGCTTG CGGCAGACGC AGCGGAACGT CAGGCTAGCG CCGAAACGGC GATGCGTGAG GACCCGGTGG TGCAGGCCCT GGGCGAGGCC TTCGGGGCCG AACTGGGCAC GGTACGCATT CGCGAGGACC GCGCGGGTGA CGAGCCGTCC GCGTCGCAAT CGATTGAACG ATAA
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Protein sequence | MSHQVLARKW RPGRFEDLVG QPHVVRALAN ALSGDRLHHA YLFAGTRGVG KTTIARILAR CLNCETGITA TPCGECRSCV EIAEGRHLDL IEVDAASRTR VDDTRELLDN VSYAPTAGRF KVYLIDEVHM LSEKSFNALL KTLEEPPDHV KFLLATTDPQ KLPVTVLSRC LQFNLKPMPP ALIAEHLTRI LEAEGLQAEP GALLRLGEAA EGSMRDALSL TDQAIAYGGD RLTESDACDM LGLLPRTRLT GLLDAAFAGD GPGLMQGLQE LKGLGPDWSR LLDELAALVH RVAVEQLVRG EGGAEDDDAA ERWARETAAR IDAETLQLTY QILIHGARDL PWAPDAQMGV EMTLLRLLAF RPEGPGEGAV SVERQGGTPA TAPRTGPSAD PATARPDATM RSAPPPIPEP PRERAQERVR EPDPGSDIGL NESAPRPRDA EPVRSPEPDS GPFDWHRFAE GLPTGTVREL ALHGELQQLD DESVVIAVAP GTLYTDRTRT RLKEALETRL GHSVRLEIVD QTQPSQATPA ARLAADAAER QASAETAMRE DPVVQALGEA FGAELGTVRI REDRAGDEPS ASQSIER
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